Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g08029 ATGGTTTCCAATACTACATCTGGAAATGTTTGCCCGGCAACGATGAAATCCACATCTAATGGCGTGTTTCAGGGAGATAATCCTCTTGATTATGCACTTCCCTTGGCTATTTTACAGATATGCATTGTTCTTTTGGTTACAAGGGGACTCGCTTATCTTCTTAAGCCTTTAAGACAACCGCGAGTTATTGCAGAGATTATTGGAGGAGTATTACTCGGGCCATCGGCACTTGGACGGAATAAAAGCTATCTGCATGCGGTTTTCCCACCAAAGAGTCTTCCAGTATTAGATACTCTAGCAAACCTTGGCCTTATATTCTTTTTATTTTTAGCAGGTATAGAGTTAGATCCTAAATCTCTCCGGAAAACTGGAGGTCGAGTCCTTGCAATTGCTGTGGCCGGAATAAGCTTACCCTTTGCACTAGGAGTTGGTTCATCATTTGTTCTGCAAGCAACAATTGCCAAAGGTGTAAATACTTCCGCATTTCTCATATTTATGGGTGTTGCTCTCTCTATAACTGCATTTCCTGTACTAGCTCGTATTTTGGCAGAGTTAAAACTTCTAACCACTAGTGTCGGCAGAATGGCTATGTCGGCTGCAGCAATTAATGACGTAGCAGCCTGGATTCTTCTTGCTCTGGCTGTGGCCTTATCAGGCGATACCCAATCTCCATTTGTGCCGTTGTGGGTCTTCTTATGTGGGTGTGTTTTTGTTGTTTGTTCTGTCCTCATTGCCCTTCCAATTTTCAAATGGATGGCCCAACAATGCCATGAAGGTGAGCCGGTTGACGAGTTATACATATGTGCTACATTAGCTGCTGTTCTGGCTGCTGGGTTTGTTACAGATGCTATTGGAATTCATGCCATGTTTGGAGCGTTTGTTTTTGGAATTTTGGTTCCAAAAGATGGACCATTTGCCGGTGCTCTTGTGGAGAAAATAGAGGATCTTGTGTCCGGTCTATTACTCCCACTCTATTTTGTGTCAAGTGGATTGAAGACTAACATAGCCACCATTCAGGGGATGCAATCTTGGGGTCTTTTAGTTTTCGTTACATTTACAGCTTGTTTTGGGAAGATTGTCGGGACTATTATTGCTTCCCTTTTATGTAAAGTACCTTTTAACGAGGCTTTAGTTCTTGGATTCTTGATGAACAGTAAAGGCTTGGTTGAATTAATTGTACTCAACATTGGTAAAGATAGAAAGGTTTTGAATGATCAGACCTTTGCTATTATGGTTCTCATGGCTCTCATCACTACCTTCATGACCACTCCTCTTGTGATGGCTGCATATAAGAGGAAGGCAAGAAAATCTGATTACAAATACAGAACAATTGAAAGGAAAAATGCAGAAAGCCAACTGAGGATTCTTGCCTGTTTCCATGGTTCAAGGAATATTCCATCTGTGATAAATTTGATCGAGACTTCAAGAGGAACCAAGAAGCACGACGCGCTTCGCGTCTATGCAATGCACCTTAAAGAATTTTCCGAGAGGTCCTCATCGATACTGATGGTACAAAAGGCAAGAGAAAACGGGTTGCCGTTTTGTAATGACAGTCACCATGGAGATTCTGTCCATGTAACTGTGGCGTTCGAGTCTTACCATAAACTAAGCCAAGTGCGTGTCCGGCCAATGGTAGCAATTTCATCAATGGCAAACATTCATGAAGACATATGTGCTACTGCTGATAGAAAGAAAGCAGCAGTCATCATTCTTCCATTTCACAAGCAACAAAGATTAGACGGTTCCCTTGACACTATAAGAAACGATTTTCGATCTGTTAACAAAAGGGTACTCGAGCATGCACCGTGCTCAGTTGGAATCTTTGTTGATCGCGGGCTTGGTGGTTCATGTCATGTTTCTGCAAGTAATGTTTCGTATTGCATTACTGTGCTTTTCTTTGGTGGGGGCGATGACCGTGAAGCTCTTGCTTATGGAGCCCGTATGGCTGAGCACCCTGGCATAAGATTAGTGGTTATTCGCTTCTTAGTCGAACCTAATATTGTAGGAGAGATTACGAGAGTTGATGTTGGAGAATCTTCGAGCACTAATTCAAACTCAGTTGACGTGGAGTTCCTTGAGGAGTTTAAGCTGAAAACAGCTAGTGATAACTCCATTACATTTGAAGAAAAAACAGTAAAAGATGCTGCAGAAACAGTTGCTACTATCCGTGAGGTTAATTGCTGCAACCTATTTCTTGTTGGTGTAAGGCCAGCCGGTGAATTGGCCTGTGCTCTAGAAAGAAGTGAGTGCCCGGAACTAGGTCCTGTTGGGGGCTTGTTGGCATCACAAGATTTCCCCACAACAGCATCAGTTCTGGTGATGCAACAGTTTCACAATGGGGTGCCAACAAGTTTTGGCCCAGAAATGGAAGAACATTCACCTGATGTAGGCACAGAATCTTCGTAG 2406 0.4281 MVSNTTSGNVCPATMKSTSNGVFQGDNPLDYALPLAILQICIVLLVTRGLAYLLKPLRQPRVIAEIIGGVLLGPSALGRNKSYLHAVFPPKSLPVLDTLANLGLIFFLFLAGIELDPKSLRKTGGRVLAIAVAGISLPFALGVGSSFVLQATIAKGVNTSAFLIFMGVALSITAFPVLARILAELKLLTTSVGRMAMSAAAINDVAAWILLALAVALSGDTQSPFVPLWVFLCGCVFVVCSVLIALPIFKWMAQQCHEGEPVDELYICATLAAVLAAGFVTDAIGIHAMFGAFVFGILVPKDGPFAGALVEKIEDLVSGLLLPLYFVSSGLKTNIATIQGMQSWGLLVFVTFTACFGKIVGTIIASLLCKVPFNEALVLGFLMNSKGLVELIVLNIGKDRKVLNDQTFAIMVLMALITTFMTTPLVMAAYKRKARKSDYKYRTIERKNAESQLRILACFHGSRNIPSVINLIETSRGTKKHDALRVYAMHLKEFSERSSSILMVQKARENGLPFCNDSHHGDSVHVTVAFESYHKLSQVRVRPMVAISSMANIHEDICATADRKKAAVIILPFHKQQRLDGSLDTIRNDFRSVNKRVLEHAPCSVGIFVDRGLGGSCHVSASNVSYCITVLFFGGGDDREALAYGARMAEHPGIRLVVIRFLVEPNIVGEITRVDVGESSSTNSNSVDVEFLEEFKLKTASDNSITFEEKTVKDAAETVATIREVNCCNLFLVGVRPAGELACALERSECPELGPVGGLLASQDFPTTASVLVMQQFHNGVPTSFGPEMEEHSPDVGTESS 801
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g08029 801 Gene3D - 35 439 IPR038770 -
Vifa1g08029 801 PANTHER CATION/H + ANTIPORTER 10 777 - -
Vifa1g08029 801 Pfam Sodium/hydrogen exchanger family 42 426 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Vifa1g08029 801 MobiDBLite consensus disorder prediction 782 801 - -
Vifa1g08029 801 FunFam Cation/H(+) antiporter 15 35 437 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g08029 Vifa-Chr1 1254799884 1254802523 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g08029 5 800 Antiporter Super Family AT5G41610 66.749 0.0 1045
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g08029 K26731 - gmx:100810155 1231.85