Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g07995 ATGGAGAACACAACAATGTTAACACCATCAAAAGTTTCAGATAGTACATTGATTTGTTATACACCAAGCATGACAACATCAAATGGTGTATGGCAAGGAGATAACCCTTTAGATTTTTCTGTCACTCTCTTCATTTTGCAATTAACCTTAGTTGTTCTTGCCACACGTTTCTTTGTTTTCATCCTCAAACCATTTAACCCTCCTCGTGTGGTTGCTGAAATCTTGGGTGGATTGTTTTTGGGGCCATCGGTGCTCGGTAGAGACGAAACCTTTGCAAATATTGTATTTCCTCTAAAAAGTGCTATGGTTTTAGAAACTTTGGCGAATATAGGTTTGATATACTTTCTGTTTCTAATTGGTTTAGAGATGGATATATCTATTGTAAAACACACGGGGAAAAAGGCGGTGTCGATTGCCATTGCTGGTATGATACTTCCCTCGATTCTTGGTGTTGGAATATCATTTGTTTTGAATAGAGATGAGAGTGTGAATGAAGTTAGCTATATTCTGTATCTTGGTATTGTTCTATCGGTTACTTCATTTCCTGTGCTGGCTCGAATGCTTACCGAGCTTAAACTGATTAATACGGAGTTAGGAAAGCTTGCCCTTTCAACTTCTCTTGTGAATGATGTGCTTGCTTGGGTTTTACTAGCTCTAGCTATTGCTTTATCAGAGTCAAATTCATCAACATTCGCTTCTATTTGGGTTGTAGTGTCAAACATTTTCTTTGTTGCTTTCTGTTTTCTTGTTGTTAGGCCATCTGTGGCTTTGTTGATAAAGAAAACTCCGGAAGGGAAACCGTTTAGCAAGTTCCAAATATGCGTTGTGCTTGTTGGTGTTATGGTTTCGGCTTTCATTACAGATGTTATTGGAACGCATTCGATTTTCGGAGCTTTTGTTTATGGATTAGTGATTCCACATGGTCCACTTGCAGCTGCTATAGTTGAAAAGCTAGAAGACTTTGTTTCGGGGCTTTTACTACCTCTTTTTTATGCTATTAGCGGACTTAAGACTAACACTACCTTAGCGAGCAGAGGTCGTTTTTGGGCATTTGTATTCGCAATTGTTCCTCTCACTTGTTTTGGAAAGATCATCGGTACTCTTATTTTTTCAATCATTTTTGGCATACCAACTCGCGATGGCGTTGTTCTTGGTTTTCTTATGAACACCAAAGGTCTAATTGAAATGATTGTGCTCAATATTGGGAGGGAACAAAAGGTCTTAGGTGAGGAAGTATTCTCGGTTATGATTATTGTAACACTTATAATGACAGCAATAGTTTCACCTATTGTGACATTAATCTATAAGCCAAGGAAAATACTCATACCTTATCGAAAGAGGACGATACAAAGTTCAAGAGTTGATGCAGAGTTAAGGGTTCTGGTGTGCATTCATTCCCCTAGAAATGTTCCCACAATAATAAATCTTCTAGAGGCTACAAACCCAACCAAAATGTCTCCAATGTGTGCTTATGTGCTCCATTTAGTGGAACTCACCGGTCGCGCTTCAGCCATGCTTTTCGTCCATGCCACTAGACAAACAGGAGGAGGTCCAGCACTCAACAAAACACAAGCGCAGACCGAACATATCACCACCGCGTTTCGTAACTTCGAGGAACATGTTAGTTACGTCACGGTCCAACCTTTAACCGCTGTTTCAGCTTACTCTACCATGCATGAAGACATATGCATTTCGGCCGAGGAAAAACGTGTAGCCACCATTATTATTCCTTTTCATAAACAACAAACAGTTGATGGAGACATGCGGGAAACAAATCCAGCATTGAGAATGGTGAACCATAATTTACTACACAATGCTCCTTGTTCGGTCGCAATACTTGTTGACAGAGGCCTTAACGGATCCAACCGGTTAACTTCAAATCAATCTTCTCATCAGGTGGCTGTGTTATTCTTCGGTGGTTCCGATGATAGGGAATCATTATCCTATGGATGGAAAATGTCAAGGCATCCAAGAGTTAAGCTCACTGTCATGCATTTCATTCAAAGAAAAGATGCAACTCAGACATTAAACGCGGACGATGATCAACAAGACGATTACAAAAGTTTAATCTCAAACAAACTAGACGAAGAGTGCATAAATGATATGAAAATGATTGCTGCAAATGATGAATCAGTAAAATACATAGAAAAAGTTGTGAGTAACGGGGAGCAAACAATAGCGGCGATAAGAGAAATCAACAATGTGAATGATTTGTTAATAGTAGGGAGAGGTCATGGAAGTTCTTCGGCATTAACCGAAGGTTTGACGGATTGGAGCGAATGTCCGGAGTTAGGAGGCATTGGAGATTTGTTAGCTTCTTCGGATTTTGAAACAACAGCTTCAGTGCTTGTTATGCATCAATATGTTGGACAAGGGCCAGATGGAGAGGATGCTTTTGCAAGTGAAAAACCATGGCAATCAAGTGAGAATTTTAATAACATGAGACAACAACACAAGGGAAGATATACAACAAAACTAGTGGGGACAGATAATCTAACATCACAGTTTTTGTAG 2514 0.3958 MENTTMLTPSKVSDSTLICYTPSMTTSNGVWQGDNPLDFSVTLFILQLTLVVLATRFFVFILKPFNPPRVVAEILGGLFLGPSVLGRDETFANIVFPLKSAMVLETLANIGLIYFLFLIGLEMDISIVKHTGKKAVSIAIAGMILPSILGVGISFVLNRDESVNEVSYILYLGIVLSVTSFPVLARMLTELKLINTELGKLALSTSLVNDVLAWVLLALAIALSESNSSTFASIWVVVSNIFFVAFCFLVVRPSVALLIKKTPEGKPFSKFQICVVLVGVMVSAFITDVIGTHSIFGAFVYGLVIPHGPLAAAIVEKLEDFVSGLLLPLFYAISGLKTNTTLASRGRFWAFVFAIVPLTCFGKIIGTLIFSIIFGIPTRDGVVLGFLMNTKGLIEMIVLNIGREQKVLGEEVFSVMIIVTLIMTAIVSPIVTLIYKPRKILIPYRKRTIQSSRVDAELRVLVCIHSPRNVPTIINLLEATNPTKMSPMCAYVLHLVELTGRASAMLFVHATRQTGGGPALNKTQAQTEHITTAFRNFEEHVSYVTVQPLTAVSAYSTMHEDICISAEEKRVATIIIPFHKQQTVDGDMRETNPALRMVNHNLLHNAPCSVAILVDRGLNGSNRLTSNQSSHQVAVLFFGGSDDRESLSYGWKMSRHPRVKLTVMHFIQRKDATQTLNADDDQQDDYKSLISNKLDEECINDMKMIAANDESVKYIEKVVSNGEQTIAAIREINNVNDLLIVGRGHGSSSALTEGLTDWSECPELGGIGDLLASSDFETTASVLVMHQYVGQGPDGEDAFASEKPWQSSENFNNMRQQHKGRYTTKLVGTDNLTSQFL 837
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g07995 837 Gene3D - 485 762 - -
Vifa1g07995 837 Gene3D - 42 439 IPR038770 -
Vifa1g07995 837 PANTHER CATION/H + ANTIPORTER 18 789 - -
Vifa1g07995 837 Pfam Sodium/hydrogen exchanger family 51 431 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Vifa1g07995 837 FunFam Cation/H(+) antiporter 15 43 441 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g07995 Vifa-Chr1 1248454151 1248456845 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g07995 13 809 Antiporter Super Family AT2G13620 61.270 0.0 997
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g07995 K26731 - gmx:100800514 1180.62