Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g07916 ATGCCCACAAAGTCAAGGAAGGTTGACTCGGTTGGCAAAGAGTTGACTCTCATACCTAGAGGTCGTGAGTTCAACTTCTATTGTCGATGTGAGGACATCTTTGGTTTGACTTTGAAAAGTTTAGTGTACACTTACTCGATAGGGATGAAGCAACATCTATATATAAACGAACCGGATCTTGTTAAAGAAATGAACCAATGTATCACTTTGAGTTTGGGTAAGCCTTCTTATATTACTAACAAACTTTCACCAATGCTTGGTAATGGCATTTTGAGAGCCAATGGTCAGAGTTGGGCACAACAGAGAAAACTTGTTGCAGCTGAGTTTTTCATGGACAAAGTTAAGGATATGGTGGGGCTTATGATAGAGTCGGCACAGCCATTACTTCTAAAATGGGAACAATTTTTTGAGGAGCAAGGTGGTGCCACTGCTGAAGTTAAAGTTGATGCTGATTTGAGAAGCTTTTCAGCTGATGTTATTTCAAGAGTTTGTTTTGGACATTCTTATTCTAAGGGAAAAGAAGTTTTCTTAAAGCTTAGAAGCATCCAAAAGATCATGTCAAACCATGGCTTCCTTTTTGGACAGAGCGGTTTCTTGTATGCACCCCTTTGA 612 0.3954 MPTKSRKVDSVGKELTLIPRGREFNFYCRCEDIFGLTLKSLVYTYSIGMKQHLYINEPDLVKEMNQCITLSLGKPSYITNKLSPMLGNGILRANGQSWAQQRKLVAAEFFMDKVKDMVGLMIESAQPLLLKWEQFFEEQGGATAEVKVDADLRSFSADVISRVCFGHSYSKGKEVFLKLRSIQKIMSNHGFLFGQSGFLYAPL 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g07916 203 Gene3D Cytochrome P450 11 202 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g07916 203 SUPERFAMILY Cytochrome P450 42 199 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g07916 203 Pfam Cytochrome P450 42 185 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g07916 203 PANTHER CYTOCHROME P450 FAMILY MEMBER 46 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g07916 Vifa-Chr1 1235630284 1235631486 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g07916 42 198 Cytochrome P450 AT5G24910 56.688 8.00e-63 198
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g07916 K20661 - gmx:100818766 270.781