Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g07865 ATGTTTACATCCAAACTTTTTTGGGTTGTATCCCTTATTAGCCTCCAACTTTTGTTGGCAAATTGTTGTTTTACAAAGAGTCTTATTCCAGCTTTGTATGTTTTTGGTGATTCAAGTGTAGATGCTGGAAATAACAACAATTTGAATACTGTTGCTAAAGCTAATAAATTCCCTTATGGCATAGATTTCAATAATTGCTCAACGGGAAGGTTTAGCAATGGCAAAACCTTTGCAGATCTTATTGCTATTAAATTAGGTTTACCAATGCCACCTCCATACATCGGTGTCTCGGAGATCGAGAGATATCAACTAACATCAGGTATCAACTATGCGTCAGGTTCATGTGGAATCTTGAATTCAACGAGAAATGGGGAATGCTTGTCATTGGAAAAACAAATTGAATATTTCACCTCAACAGTGATGAATGATCTTCCAAGAAACTTTCGGAGCAAAACAAAATTGAGGAATTACTTATCAAAATCTATATTTCTTTTATCAGTTGGTTCCAATGATTATATTCTTAATTATTTTAAACAAGCAATGGGACCAAACCAAATGGTTAATCCTGAAGAATTTACTGATTATCTTCTTGACCAACTTTGTTCAAATATAAAAAAAATTTATTATCTAGGAGGAAGAAAATTAGTGATAATTGGCATAGGTCCAATTGGTTGTATCCCATGTTTTATCATAAAAAAACCATATTACCAGGATTGCAATGAAGTTATTAATGAAGTAGTTAAGCTCTTCACAAACAAACTCCCAAAAAAGCTTCAAGAGTTGAAATTGAAATCCAATCTCTCAAGATTAGTATTCACTATTTTGGACGGTTTTAAATTGTTCAGAAAGATACAAAGCTCCCCTGAAAAATATGGTTTGACAAATATTTGGGATTCATGTGTTGGAGAAGGAGGAAAACCTTGTGAGAATCGAAAGGAATATTGTTTTTATGATTTCGCCCATAGCACTGAAGCTGTAAATGAAATATATGCAGATAGGTGTTTTGGTGGAAGAGATACATGTTTTCCTCTTAATATTAAGAAATTAGTTCATGCACATTAA 1062 0.3286 MFTSKLFWVVSLISLQLLLANCCFTKSLIPALYVFGDSSVDAGNNNNLNTVAKANKFPYGIDFNNCSTGRFSNGKTFADLIAIKLGLPMPPPYIGVSEIERYQLTSGINYASGSCGILNSTRNGECLSLEKQIEYFTSTVMNDLPRNFRSKTKLRNYLSKSIFLLSVGSNDYILNYFKQAMGPNQMVNPEEFTDYLLDQLCSNIKKIYYLGGRKLVIIGIGPIGCIPCFIIKKPYYQDCNEVINEVVKLFTNKLPKKLQELKLKSNLSRLVFTILDGFKLFRKIQSSPEKYGLTNIWDSCVGEGGKPCENRKEYCFYDFAHSTEAVNEIYADRCFGGRDTCFPLNIKKLVHAH 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g07865 353 Gene3D SGNH hydrolase 22 336 IPR036514 -
Vifa1g07865 353 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE-RELATED 10 349 - -
Vifa1g07865 353 CDD SGNH_plant_lipase_like 30 338 IPR035669 -
Vifa1g07865 353 Pfam GDSL-like Lipase/Acylhydrolase 32 332 IPR001087 GO:0016788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g07865 Vifa-Chr1 1227429563 1227431657 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g07865 28 352 Acyl Lipid Metabolism Gene Families AT4G10950 32.749 4.08e-53 178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g07865 - - aprc:113856642 445.277
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g07865 1 1227429563 1227431657 Vifa1g07865 1 1227429563 1227431657 ECH
Vifa1g07865 1 1227429563 1227431657 Vifa2g04520 2 1330947428 1330949850 PCT
Vifa1g10208 1 1697339416 1697344646 Vifa1g07865 1 1227429563 1227431657 PCT
Vifa1g07865 1 1227429563 1227431657 Vifa1g10210 1 1698046451 1698047955 PCT