Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g07863 ATGTTTACATCCAAACTTTTTTGGGTTGTATCCCTTATTAGCCTCCAACTTTTGTTGGCAAATTGTTGTTTTACAAAGAGTCTTGTTCCAGCTTTGTATGTTTTTGGTGATTCAAGTGTAGATGCTGGAAATAACAACAATTTGAATACTGTTGCTAAAGCTAATAAATTCCCTTATGGCATAGATTTCAATAATTGCTCAACGGGAAGGTTTAGCAATGGCAAAACCTTTGCAGATCTTATTGCTATTAAATTAGGTTTACCAATGCCACCTCCATACATCGGTGTCTCGGAGATCGAGAGATATCAACTAACATCAGGTATCAACTATGCGTCAGGTTCATGTGGAATCTTGAATTCAACGAGAAATGGGGAATGCTTGTCATTGGAAAAACAAATTGAATATTTCACCTCAACAGTGATGAATGATCTTCCAAGAAACTTTCAGAGCAAAACAAAATTGAGGAATTACTTATCAAAATCTATATTTCTTTTATCAGTTGGTTCCAATGATTATATTCTTAATTATTTTAAACAAGCAATGGGACCAAACCAAATGGTTAATCCTGAAGAATTTACTGATTATCTTCTTGACCAACTTTGTTCAAATATAAAAAAAATTTATGATCTAGGAGGAAGAAAATTAGTGATAATTGGCATAGGTCCAATTGGTTGTATCCCATGTTTTATCATAAAAAAACCATATTATCAGGATTGCAATGAAGTTATTAATGAAGTAGTTAAGCTCTTCACAAACAAACTCCCAAAAAAGCTTCAAGAGTTGAAATTGAAATCCAATCTCTCAAGATTAGTATTCACTATTTTGGACGGTTTTAAATTGTTCAGAAAGATACAAAACTCCCCTGAAAAATATGGTTTGACAAATATTTGGGATTCATGTGTTGGAGAAGGAGGAAAACCTTGTGAAAATCGAAAGGAATATTTTTTTTATGATTTTGCCCATAGCACTGAAGCTGTAAATGAAATATATGCAGATAGGTGTTTTGGTGGAAGAGATACATGTTTTCCTCTTAATATTAAGAAATTAGTTCATGCACATTAA 1062 0.3249 MFTSKLFWVVSLISLQLLLANCCFTKSLVPALYVFGDSSVDAGNNNNLNTVAKANKFPYGIDFNNCSTGRFSNGKTFADLIAIKLGLPMPPPYIGVSEIERYQLTSGINYASGSCGILNSTRNGECLSLEKQIEYFTSTVMNDLPRNFQSKTKLRNYLSKSIFLLSVGSNDYILNYFKQAMGPNQMVNPEEFTDYLLDQLCSNIKKIYDLGGRKLVIIGIGPIGCIPCFIIKKPYYQDCNEVINEVVKLFTNKLPKKLQELKLKSNLSRLVFTILDGFKLFRKIQNSPEKYGLTNIWDSCVGEGGKPCENRKEYFFYDFAHSTEAVNEIYADRCFGGRDTCFPLNIKKLVHAH 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g07863 353 Pfam GDSL-like Lipase/Acylhydrolase 32 332 IPR001087 GO:0016788
Vifa1g07863 353 CDD SGNH_plant_lipase_like 30 338 IPR035669 -
Vifa1g07863 353 Gene3D SGNH hydrolase 22 336 IPR036514 -
Vifa1g07863 353 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE-RELATED 10 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g07863 Vifa-Chr1 1227338543 1227340637 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g07863 28 352 Acyl Lipid Metabolism Gene Families AT4G10950 32.749 9.50e-54 180
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g07863 - - aprc:113856642 453.366
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g07863 1 1227338543 1227340637 Vifa1g07863 1 1227338543 1227340637 ECH
Vifa1g07863 1 1227338543 1227340637 Vifa2g00442 2 75197048 75198719 PCT
Vifa1g07863 1 1227338543 1227340637 Vifa1g10208 1 1697339416 1697344646 PCT