Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g07848 ATGTGGCTTCTTACTTCAAAAAATGTCTTCATATGTATGTTGATGTTGCTCTCAATGGACATTACTCTGGGAAAGAAACATGTAACTATTACGAACACGTTTGAAGACAATTTGAACTTAATCATTCATTGCAGTTCTAGAAACGATGATCTTGGAGTTCATACTCTTCATCCGGGTGATAGTTTTAGTTGGAGTTTCAACAACAATGTTATTGGCTTTATAACCCATTTCAAATGTTCCTTTCAATGGAGTAGTGACATTCATTGGTTTGATATATATGTTCAAGATAGAGAATCTGGTGATTGTAGGCTTTGCAATTGGTTTGTAAAGAAAGATGGACCATGTCGGATTCTATCTCCAGAGAAAACAACATGTTATCCTTGGAAGAGTTAA 393 0.3486 MWLLTSKNVFICMLMLLSMDITLGKKHVTITNTFEDNLNLIIHCSSRNDDLGVHTLHPGDSFSWSFNNNVIGFITHFKCSFQWSSDIHWFDIYVQDRESGDCRLCNWFVKKDGPCRILSPEKTTCYPWKS 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g07848 130 Pfam Plant self-incompatibility protein S1 27 128 IPR010264 -
Vifa1g07848 130 PANTHER - 24 116 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g07848 Vifa-Chr1 1224951974 1224952366 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g07848 28 130 Carbohydrate Esterase AT3G16970 41.284 4.67e-20 78.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g07848 - - cam:101513244 137.502