Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g07831 ATGGATTTCACATCAGGGAAGAACGCATCAGAAAACAACAACAACAACTCAGAAAACTCTCACCAAATCTCCGATTCTTCTTCCCAATTACCTTCCGATTCCTTCAATATCAAAGAAACCGAAGAACGACAAGCACGTGAACTCAAAGCTGGTCTTCATCCTCTAAAGAGCAAGTTTGTATTTTGGTACACTCGCCGGGTACCTGGAATTCGAAATCAATCATATGAGGACAACATAAAGAAGATTGTCGAATTCAGTACGGTTGAAGGATTTTGGGTCTGTTACTGCCATATTTCTCGTCCTGCTTCTTTGCCTAGTCCAACAGATTTGCACCTTTTCAAAGAAGGAATTCGTCCTTTATGGGAGGACTCTGCTAACTGCAGTGGTGGAAAATGGATTATACGATTCAAGAAGGCTGTTTCAGGTCGTTTTTGGGAGGACCTGGTGCTTGCTTTAGTGGGTGACCAGTTGGATTATGGTGATAACATATGCGGTGCAGTACTAAGCATTCGATTTAACGAGGATATAGTGAGTGTCTGGAACCGCAATGCTTCTGATAATCAGGCTGTAATGGCTTTGAGAGATTCGATTAAGCGTCACTTAAAGCTTCCTCACAGCTACGTTATGGAGTACAAGCCCCACGATGCTTCTCTGCGAGACAATTCATCTTACAGGAATACTTGGTTGAGAGGCTAG 696 0.4296 MDFTSGKNASENNNNNSENSHQISDSSSQLPSDSFNIKETEERQARELKAGLHPLKSKFVFWYTRRVPGIRNQSYEDNIKKIVEFSTVEGFWVCYCHISRPASLPSPTDLHLFKEGIRPLWEDSANCSGGKWIIRFKKAVSGRFWEDLVLALVGDQLDYGDNICGAVLSIRFNEDIVSVWNRNASDNQAVMALRDSIKRHLKLPHSYVMEYKPHDASLRDNSSYRNTWLRG 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g07831 231 MobiDBLite consensus disorder prediction 1 33 - -
Vifa1g07831 231 FunFam Eukaryotic translation initiation factor NCBP 25 224 - -
Vifa1g07831 231 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED 16 220 IPR001040 GO:0003723|GO:0003743|GO:0006413
Vifa1g07831 231 SUPERFAMILY eIF4e-like 44 227 IPR023398 -
Vifa1g07831 231 Gene3D RNA Cap, Translation Initiation Factor Eif4e 27 224 IPR023398 -
Vifa1g07831 231 ProSitePatterns Eukaryotic initiation factor 4E signature. 109 132 IPR019770 GO:0003723|GO:0003743|GO:0005737|GO:0006413
Vifa1g07831 231 Pfam Eukaryotic initiation factor 4E 54 211 IPR001040 GO:0003723|GO:0003743|GO:0006413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g07831 Vifa-Chr1 1223141498 1223144190 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g07831 11 231 Eukaryotic Initiation Factors Gene Family AT5G18110 75.113 7.86e-126 353
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g07831 K03259 - gmx:100499744 398.667
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g07831 1 1223141498 1223144190 Vifa1g07831 1 1223141498 1223144190 ECH