Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g07826 ATGGCATATCAAAACTCAATTACCTTGAAAGTTTCAGTATTGTTAATAGTTTTACTAGGAGCCGAGGCTAGGGATTTCTCTTTTTTTTCTCACAAAACCGTTATAATTAGGAATGATATTTCCCCACATCCAACCGCTTTAGATCTCATTGTTCATTGCAAATCAAAAAATGATGATCTTGGATTTCACACACTTGCATTTGGAGGAACTTACTCGTTTCAGTTTAGACCATTATTTTTTCCAAAATTAGGTCAAACTTTATTCTTTTGTAGCTTTACATGGAAAGGAAACCCCAATCCTCACTATCTTAACGTTTACAATCAAGCTGTGGATGACTGCAAAGTTTGCAGTTGGAAAATAAATACAACTGGTGGTTGTAACGATTTTAAAGGATATGAGGAATGTCGAAAATGGAAGGCGGCATTTAACTAG 432 0.3495 MAYQNSITLKVSVLLIVLLGAEARDFSFFSHKTVIIRNDISPHPTALDLIVHCKSKNDDLGFHTLAFGGTYSFQFRPLFFPKLGQTLFFCSFTWKGNPNPHYLNVYNQAVDDCKVCSWKINTTGGCNDFKGYEECRKWKAAFN 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g07826 143 PANTHER - 29 128 IPR010264 -
Vifa1g07826 143 Pfam Plant self-incompatibility protein S1 33 138 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g07826 Vifa-Chr1 1221619483 1221619914 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g07826 33 126 Carbohydrate Esterase AT3G16970 46.000 2.57e-21 82.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g07826 - - psat:127105312 169.088