Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g07812 ATGATTGAACCTGGATTGAACAATCTAGCATGTCATATTTCATTAGACAATTGTACACAACAATTTAACATAATTTCAGGTACCTCAATGTCTTGTCCTCATCTCAACGGCATTGTATGGCTGTTGAAAAACTCTCTTCCAAATTGGTCACCGACTGATATAAAATCAGCAACCATGACAACTGCTAACAAGGTTAATCTTCATGGAAAGGGTATTTTGGATCAAAGACTTCTACCAACTGATGTATTTGTGACCGGTGCTCGACATGTTAACCCTTTGAAAGAACACGATTCAAGACTTGTTTATGACATTGAAACAAATGATTACATTCCTTATTTGTGCATTTTGAATTATATTGATAAACAAGTCAGACTTATTTTCCAACATAAAGTGAAATGA 399 0.3434 MIEPGLNNLACHISLDNCTQQFNIISGTSMSCPHLNGIVWLLKNSLPNWSPTDIKSATMTTANKVNLHGKGILDQRLLPTDVFVTGARHVNPLKEHDSRLVYDIETNDYIPYLCILNYIDKQVRLIFQHKVK 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g07812 132 Gene3D Peptidase S8/S53 domain 16 109 IPR036852 GO:0004252|GO:0006508
Vifa1g07812 132 Pfam Subtilase family 6 66 IPR000209 GO:0006508|GO:0008236
Vifa1g07812 132 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 2 127 IPR045051 -
Vifa1g07812 132 SUPERFAMILY Subtilisin-like 13 97 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g07812 Vifa-Chr1 1219718784 1219719182 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g07812 1 130 Subtilisin-like Serine Gene Family AT1G04110 44.203 4.51e-30 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g07812 - - lja:Lj2g3v2002920.1 171.785