Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g07811 ATGTTCGCAGGTGCACTTAATACAAGTGATGATTCCATTCTGGTTTGTAGTCCAACTTCCATGAATAATATAGATGTTAAGGGAAAGGTAGTTTTGTGTGAGTTAGGTGGGCTTGTTGCAAGAGTAGACAAAGTTCAAGCAGTTAAGGATGTTGATGGTGGTGCCATGGTCCTTATGAATAGCAAAAATCACACTTTCAATCCAATTTATGATGTTCGTGTTCTACCTGCAGTTGATGTAAGTTTCTCGGTTGGTACCTCAATGTCTTGTCCTCATCTCAGCGAAATTGTAGTGTTGTTGAAAAAATCTCACCCAGATTGGTCACTGGCTTCTATAATATCAGCAATCATGACAATTGCTAACAAGGTTAATCTTCACGAGAAGTTTATTTTGGATCAAAGACTTCTACCAACTGATGTATTTGCGACCGGTGCTGGACATGTTAACCCTTTGAAAGCAAACGATCTGGGACATGTTGATATTGAAACAAATGATTACATTCTTTATTTGTGTGGTTTGAATTAG 525 0.381 MFAGALNTSDDSILVCSPTSMNNIDVKGKVVLCELGGLVARVDKVQAVKDVDGGAMVLMNSKNHTFNPIYDVRVLPAVDVSFSVGTSMSCPHLSEIVVLLKKSHPDWSLASIISAIMTIANKVNLHEKFILDQRLLPTDVFATGAGHVNPLKANDLGHVDIETNDYILYLCGLN 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g07811 174 Gene3D Peptidase S8/S53 domain 79 166 IPR036852 GO:0004252|GO:0006508
Vifa1g07811 174 Pfam Subtilase family 87 123 IPR000209 GO:0006508|GO:0008236
Vifa1g07811 174 CDD PA_subtilisin_like 1 86 - -
Vifa1g07811 174 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 14 83 IPR045051 -
Vifa1g07811 174 Pfam PA domain 17 86 IPR003137 -
Vifa1g07811 174 SUPERFAMILY Subtilisin-like 74 156 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g07811 Vifa-Chr1 1219701118 1219701877 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g07811 77 173 Subtilisin-like Serine Gene Family AT4G26330 45.455 1.30e-22 92.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g07811 - - lja:Lj2g3v2002920.1 132.494