Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g07810 ATGACCATAAAAAAGATGAAACTAGCACCAATATTACTTCTTGGTTTCATTCTTGTGCTAAGTATTTGTCAAACTTCAGCTCACAAATACCAAGAATTCACAGTTGCAAATGATGAACTAGAAGATGAAAGTAGCTTGTTGACTTACATTGTTCACGTGAAAAAGCCTTCTCTTCAATCTAAGGAGAGTTTGCATGGTTGGTACCATTCACTCTTGCCAGCCACTACAAAAACTCTAAACCAGAAACGCATTATTTTCTCATACCAAAACATAGTTGATGGATTTGCCGTGAAGTTGACTCCGGAAGATGCGAGGGCTTTAGAAGAGAAGGAGGAGGTTCTGTCAACTCGACCGGAGAAAATCCATTCGTTACACACAACTCATACTCCAAGCTTCTTGGGGTTGCAACCAAGTCAGGAGTTGTGGAAGAGTTCTGATCTTGGTAAAGGGATCATAATTGGAATCCTGGACACTGGTATATACCCTTCCCATCCTTCTTTTTCCGACGAGGGAATGACGTCTCCACCTGCAAAATGGAATGGCTACTGCGAATTCACAGGGGAGAGGATTTGTAACAATAAGATCATCGGAGCGAGGAACTTCGTAAAAAATTCATCTCTTCCGTTTGATGACATAGGCCACGGAACTCACACGGCTAGCACAGCCGCGGGAAGGCCCGTGCAAGGTGCCAATGTCTTTGGCAATGCCAATGGCACAGCAACAGGCATGGCACCAGATGCACACTTGGCAATTTACAAAGTATGCAACAACAACGGTTGTACCCAAAGCGCAATACTAGCTGGAATGGACGCTGCAGTTGAGGATGGTGTTGATGTACTTTCACTCTCTCTAGGAATACCCTCCACTCCTTTCTTTGAAGACGGAATTGCACTTGGTGCATTTAGTGCAATTAAAAAGGGAATTTTCGTTAGTTGTTCAGCTGCAAATGGAGGTCCAGCATATGCTACATTGTCCAATGAAGCACCATGGGTTCTAACAGTTGGTGCTAGCACAATTGACAGAAAAATAGAAGCAGTAGCTAAGCTTGGAAACGGGGCGGAATATCTCGGAGAATCAGTTTTCCAACCAAAAGACTTTGCATCAACACTACTGCCACTTGTGTATGCAGGTGCACTTAATACAAGTGATGATTCCATTCTCTTTTGCAGTCCTACTTCCATGGAGAACATTGATGTTAAGGGAAAGGTAGTGTTGTGTGAGCTAGGTGGGCTTGTTGAAAGAGTAGACAAAGGTCAAGCAGTTAAGGATGCTGATGGTGCTGCCATGATCCTCATGAATAGCCAAAAATCACGCTTTCAATCCAATTTCTGA 1332 0.4347 MTIKKMKLAPILLLGFILVLSICQTSAHKYQEFTVANDELEDESSLLTYIVHVKKPSLQSKESLHGWYHSLLPATTKTLNQKRIIFSYQNIVDGFAVKLTPEDARALEEKEEVLSTRPEKIHSLHTTHTPSFLGLQPSQELWKSSDLGKGIIIGILDTGIYPSHPSFSDEGMTSPPAKWNGYCEFTGERICNNKIIGARNFVKNSSLPFDDIGHGTHTASTAAGRPVQGANVFGNANGTATGMAPDAHLAIYKVCNNNGCTQSAILAGMDAAVEDGVDVLSLSLGIPSTPFFEDGIALGAFSAIKKGIFVSCSAANGGPAYATLSNEAPWVLTVGASTIDRKIEAVAKLGNGAEYLGESVFQPKDFASTLLPLVYAGALNTSDDSILFCSPTSMENIDVKGKVVLCELGGLVERVDKGQAVKDADGAAMILMNSQKSRFQSNF 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g07810 443 CDD Peptidases_S8_3 124 339 IPR034197 -
Vifa1g07810 443 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 49 437 IPR045051 -
Vifa1g07810 443 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 33 125 IPR037045 -
Vifa1g07810 443 PRINTS Subtilisin serine protease family (S8) signature 148 167 IPR015500 -
Vifa1g07810 443 PRINTS Subtilisin serine protease family (S8) signature 390 406 IPR015500 -
Vifa1g07810 443 PRINTS Subtilisin serine protease family (S8) signature 210 223 IPR015500 -
Vifa1g07810 443 Gene3D - 340 440 - -
Vifa1g07810 443 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 153 164 IPR023827 -
Vifa1g07810 443 Pfam Subtilase family 148 344 IPR000209 GO:0006508|GO:0008236
Vifa1g07810 443 CDD PA_subtilisin_like 346 433 - -
Vifa1g07810 443 ProSiteProfiles Serine proteases, subtilase domain profile. 129 443 - -
Vifa1g07810 443 Gene3D Peptidase S8/S53 domain 150 339 IPR036852 GO:0004252|GO:0006508
Vifa1g07810 443 Pfam Peptidase inhibitor I9 48 124 IPR010259 -
Vifa1g07810 443 Pfam PA domain 372 435 IPR003137 -
Vifa1g07810 443 SUPERFAMILY Subtilisin-like 124 378 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g07810 Vifa-Chr1 1219683336 1219684667 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g07810 48 434 Subtilisin-like Serine Gene Family AT5G67360 44.089 7.66e-105 326
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g07810 - - gmx:100799902 595.89