Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g07809 ATGCAACTTACATTGCTTGTTAGTCTTATTGTAGTTCTCTGCATCATCAACCAAATTTCAGTATTTGCTGTAGAGGAAAATCATGAACATGATCACAACTTAATGACATACATTGTACATGTCAAAAAATCAGAAAATGTAGCTTCGTTTCAATCAGAAGATTTGCATACTTGGTATCATTCATTCCTTCCACAAACTTTTGCTCACAAAGAGAGAATGGTTTTCACTTACAGCAATGTAGCCTCTGGATTCGCGGTGAAGTTGACACCAAAAGAAGCCAAAGATCTTCAAGAGAAAGGTGAAATTGTGTCGGCAAGACGTGAAAGGACACTTTCATTACACACAACTCACACTCCAACTTTCTTGGGGTTGAAACAAGGGCAAGGATTATGGAGTGATGATAACCTTGGAAAAGGCGTCATAATTGGAGTCATAGACACAGGTATATACCCTTTTCACCCATCATTCAACGACGAAGGAATGCCACCACCACCTGCAAAATGGAAAGGTCACTGCGAATTCACTGGTGGAGCAATTTGCAACAATAAGCTCATTGGTGCAAGAAGCTTAGTCAAAGGCGCAATTCAAGAGCCTCCATTTGAGAATTTCTTCCACGGAACACACACTGCAGCAGAAGCTGCAGGAAGGTTCGTAGAAGATGCAAGTGTTTTTGGTAATGCTAAAGGTGTAGCAGCTGGTATGGCACCAAATGCTCATATAGCAATGTACAAAGTTTGTAATGATAAAGTTGAATGCCCTGAAAGTGCTATTTTAGCTGCAATGGATATAGCTATTGAAGATGGTGTAGATGTTCTTTCACTTTCACTTGGTTTAGGTTCTCTTTCATTCTTTGAAGACCCAATTGCAATTGGTGCTTTTGCTGCTACTCAAAAAGGAGTTTTTGTTAGTTGCTCTGCAGCAAACTCTGGCCCTGCCTATAGCACTCTCTCAAATGAAGCTCCTTGGATCCTCACAGTAGGTGCTAGCACAATTGACAGAAAAATAGCAGCATCCGCAAAGCTTGGGAATGGTGAAGAATTTGAAGGTGAAACATTGTACCAACCTAAGGACTTTTCGCAACAATTATTGCCACTTGTGTATGGAGGTTCATATGGATATGGAAACTCAAGTCAGAATCAATCATTTTGTTTACCAGGCTCCTTAAAGAACGTTGGCGTACGAGGAAAAGTAGTGTTGTGTGATATAGGAGGAGATGTTTCAAGTATTGTGAAAGGACAAGAAGTTCTAAATTCAGGTGGCGTTGCCATGATCCTTGCAAACTCAGAAGCCATTGGATTCAGCACTTTCGCTATTCCTCATGTTTTACCTGCTGTTGAAGTAAGTTATGTAGCTAGTTTGATAATCAAAGATTACATAAACAAAACCAACAATCCAACAGCATCAGTGTCATTCAAAGGAACAATAATTGGTGATTCAAATGCTCCTTCTGTTGTTTCATTTTCTTCTAGAGGACCAAGTCGAGAAAGTCCAGGAATCTTAAAACCAGACATCATTGGACCAGGGGTTAACATTCTTGCTGCATGGGCGCTTTCTCTAGACAACAAACTCCCACCTTATAACATTGTTTCTGGTACTTCGATGTCTTGTCCTCATCTCAGCGGTATTGCTGCATTGATCAAAAGTTCTCACCCTGATTGGTCTCCGGCCGCTATAAAATCAGCAATCATGACAACTGCTAATACTCTCAACCTTGGTGGTTTACCTATAACAGATCAAAGGCATTTACCTGCTGATGTTTTCGCTACCGGTGCAGGACATGTTAATCCTGTTAAAGCAAATGATCCTGGTCTTGTTTATGATATTCAACCAGAAGATTATGTTCCTTATTTGTGTGGTTTGGGTTATTCTGATGAAGAGATTGAAATTATTGTTCAGTGGAAAGTGAAGTGTTCTGCTGTGAAAAGTATAGCAGAAGCAGAACTGAATTATCCTTCTTTCTCTATTCTTATGGGTTCTGAATCACAGTTTTATACCAGAACATTGACTAATGTTGGGTTTGAAAATTCAACTTATAGAGCTGAACTTGAAGTGCCTTTGGCTTTGGGTATGAGTGTGAATCCAAGTGAAATAACATTTTCTGAGATCAATGAGAAGGTTAGTTTCTCTGTGGATTTTATACCTCAGATTAAGGAAAACAGAAGGAATCATACTTTTGCTCAGGGTTCTCTTACATGGGTTTCTGACAAACATGTCGTTAGGATCCCAATATCGGTGATTTTCAAATGA 2247 0.3956 MQLTLLVSLIVVLCIINQISVFAVEENHEHDHNLMTYIVHVKKSENVASFQSEDLHTWYHSFLPQTFAHKERMVFTYSNVASGFAVKLTPKEAKDLQEKGEIVSARRERTLSLHTTHTPTFLGLKQGQGLWSDDNLGKGVIIGVIDTGIYPFHPSFNDEGMPPPPAKWKGHCEFTGGAICNNKLIGARSLVKGAIQEPPFENFFHGTHTAAEAAGRFVEDASVFGNAKGVAAGMAPNAHIAMYKVCNDKVECPESAILAAMDIAIEDGVDVLSLSLGLGSLSFFEDPIAIGAFAATQKGVFVSCSAANSGPAYSTLSNEAPWILTVGASTIDRKIAASAKLGNGEEFEGETLYQPKDFSQQLLPLVYGGSYGYGNSSQNQSFCLPGSLKNVGVRGKVVLCDIGGDVSSIVKGQEVLNSGGVAMILANSEAIGFSTFAIPHVLPAVEVSYVASLIIKDYINKTNNPTASVSFKGTIIGDSNAPSVVSFSSRGPSRESPGILKPDIIGPGVNILAAWALSLDNKLPPYNIVSGTSMSCPHLSGIAALIKSSHPDWSPAAIKSAIMTTANTLNLGGLPITDQRHLPADVFATGAGHVNPVKANDPGLVYDIQPEDYVPYLCGLGYSDEEIEIIVQWKVKCSAVKSIAEAELNYPSFSILMGSESQFYTRTLTNVGFENSTYRAELEVPLALGMSVNPSEITFSEINEKVSFSVDFIPQIKENRRNHTFAQGSLTWVSDKHVVRIPISVIFK 748
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g07809 748 Pfam Subtilase family 137 570 IPR000209 GO:0006508|GO:0008236
Vifa1g07809 748 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 37 745 IPR045051 -
Vifa1g07809 748 Pfam Peptidase inhibitor I9 36 114 IPR010259 -
Vifa1g07809 748 SUPERFAMILY Subtilisin-like 113 604 IPR036852 GO:0004252|GO:0006508
Vifa1g07809 748 Gene3D - 332 476 - -
Vifa1g07809 748 FunFam subtilisin-like protease SBT1.5 332 476 - -
Vifa1g07809 748 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 142 153 IPR023827 -
Vifa1g07809 748 PRINTS Subtilisin serine protease family (S8) signature 137 156 IPR015500 -
Vifa1g07809 748 PRINTS Subtilisin serine protease family (S8) signature 201 214 IPR015500 -
Vifa1g07809 748 PRINTS Subtilisin serine protease family (S8) signature 530 546 IPR015500 -
Vifa1g07809 748 Gene3D Peptidase S8/S53 domain 139 613 IPR036852 GO:0004252|GO:0006508
Vifa1g07809 748 ProSiteProfiles Serine proteases, subtilase domain profile. 121 600 - -
Vifa1g07809 748 Gene3D - 617 747 - -
Vifa1g07809 748 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 20 114 IPR037045 -
Vifa1g07809 748 Pfam PA domain 364 451 IPR003137 -
Vifa1g07809 748 Pfam Fibronectin type-III domain 647 745 IPR041469 -
Vifa1g07809 748 CDD PA_subtilisin_like 340 469 - -
Vifa1g07809 748 CDD Peptidases_S8_3 113 567 IPR034197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g07809 Vifa-Chr1 1219653547 1219655793 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g07809 36 748 Subtilisin-like Serine Gene Family AT1G04110 43.684 0.0 571
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g07809 - - gmx:100783595 1137.09