Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g07802 ATGACTTTGGTGGTGGATGAACATAAGATGAATGATAAATTTCCTATTGGAATGAGAGTTCTTGCTGTTGATGATGACAGAACTTGTCTCATGATTTTGGAGAAACTTCTCCTAAAGTGTCAATATCACGTAACTACGGCTAAAAATGCGATAGACGCGCTGAATTTGTTGAGAGAAAACAAAAAGAATTTCGACTTAGTAATCAGTAATGTTCATATGCCAGACATGGATGGATTTAAGCTTCTTGAGCTTATTGGACTTGAGATGGATTTACCTGTCATTATGTTTTCTGTGAATGATGATCTGAAGATGGTGATGAAAGGAATTACTCATGGTGCTTGTGATTATCTGCTGAAACGTGTTAGATTGAAAGAGGTGCAAATTATTTGGCAGCATGTGATTCGGAAGAAGAAAGGTAAAAGAAGCAATTCGGATAGCGTAAATGGAATAGATTCGGCTGTGATAGGAAGTTCGGATCAAAATGTGAAGCCATATAGAAAAAGAAAGGATAAGAATGAAAACGACGATGAGGAAGAGAATGAAGATGATGATGACGACGATGAGGATCCATCGGCGTAG 579 0.3765 MTLVVDEHKMNDKFPIGMRVLAVDDDRTCLMILEKLLLKCQYHVTTAKNAIDALNLLRENKKNFDLVISNVHMPDMDGFKLLELIGLEMDLPVIMFSVNDDLKMVMKGITHGACDYLLKRVRLKEVQIIWQHVIRKKKGKRSNSDSVNGIDSAVIGSSDQNVKPYRKRKDKNENDDEEENEDDDDDDEDPSA 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g07802 192 Gene3D - 18 180 - -
Vifa1g07802 192 MobiDBLite consensus disorder prediction 175 192 - -
Vifa1g07802 192 PANTHER TWO-COMPONENT RESPONSE REGULATOR 18 160 IPR045279 GO:0009736
Vifa1g07802 192 CDD REC_typeB_ARR-like 20 134 - -
Vifa1g07802 192 ProSiteProfiles Response regulatory domain profile. 19 134 IPR001789 GO:0000160
Vifa1g07802 192 MobiDBLite consensus disorder prediction 145 159 - -
Vifa1g07802 192 MobiDBLite consensus disorder prediction 141 192 - -
Vifa1g07802 192 Pfam Response regulator receiver domain 20 125 IPR001789 GO:0000160
Vifa1g07802 192 SMART REC_2 18 130 IPR001789 GO:0000160
Vifa1g07802 192 SUPERFAMILY CheY-like 17 143 IPR011006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g07802 Vifa-Chr1 1218791991 1218792569 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g07802 12 171 Response Regulator Gene Family AT2G25180 65.455 4.49e-67 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Vifa1g07802 Response_reg 1.2e-21 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g07802 - K14491 psat:127097478 308.531