Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g07801 ATGTCAATAAACAATAATGTGATAGATGTTTTACAAGATCAAAAGTGGGCGCCTATGCCCTGGAAAAAGTTGCAGGTCAGAGATATTATCAAGGTGATGATGAATTCAATGAATGTTCCTTCCAAAAGAAGTACACTGGAGAGGAAACTTGACAAGCTCATACTCGCTCTCTTTGCAACACTCTTTATGATGTGTTTCATTGGAGCCATAGGCAGCGCTATTTTTGTGAACAAAAAATACTTCTATTTACATCTTGATTCATCAGAGGAGGGCTCAGCACAGTTCAATCCAAAAAACAGATTTCTGGTTTTTATCCTGACTATGTTTACCCTTATCACACTGTATTCAACAATCATCCCAATTTCACTTTATGTGTCTATAGAGATGATAAAATTTATTCAATCAACTCAATTTATCAACAAGGATTTGGGAATGTACCACAATGAAACTAATACACCGGCACTGGCCAGAACTTCAAATCTGAATGAAGAACTTGGACAGGTGGAATACATTTTCTCTGACAAAACTGGGACCCTAACAAATGGAGTTCTTCAAGTGTTCGATAGGAGTAGAGGTCTATGGAAATGGTGTGACTGA 597 0.3735 MSINNNVIDVLQDQKWAPMPWKKLQVRDIIKVMMNSMNVPSKRSTLERKLDKLILALFATLFMMCFIGAIGSAIFVNKKYFYLHLDSSEEGSAQFNPKNRFLVFILTMFTLITLYSTIIPISLYVSIEMIKFIQSTQFINKDLGMYHNETNTPALARTSNLNEELGQVEYIFSDKTGTLTNGVLQVFDRSRGLWKWCD 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g07801 198 ProSitePatterns E1-E2 ATPases phosphorylation site. 174 180 IPR018303 -
Vifa1g07801 198 FunFam Phospholipid-transporting ATPase IC 169 180 - -
Vifa1g07801 198 SUPERFAMILY Calcium ATPase, transmembrane domain M 22 166 IPR023298 -
Vifa1g07801 198 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 31 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g07801 Vifa-Chr1 1218789199 1218791420 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g07801 1 32 Primary Pumps ATPases AT1G59820 59.375 8.67e-09 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g07801 K14802 - gmx:100787473 291.197