Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g07762 ATGGCAGCTACAGGGAGGGTTTCTATACTGGTTCTCATGAGCCTTGTCACTTACATGTCTGGCACTGCAGAATCTTCTATAACCTCTGCAGAATTCATCAAGTCCTCGTGCAGGTCTACTCGCTACCCTGTTTTATGTGTTCAATGTCTCATGGGGTACGCGAGCGTGATTGGCCAAAGCGAGCGACAACTAGCCATAACTGCTATATCAGTGAGCATATCCAGGACACGATCAAGTGCATCATATGTGAAGAAGATATCAAAAGCAAGAGGCGTGAAGCCAAGGGAGTACAGAGCCATACAAGACTGCATAGAGAACATGGGTGACAGTTTGGACAGTCTTAGCCAGTCGGTAAGGGAGTTAGGCAGTATCGGTCATGCTGTTGGGGAGGATTTCGAGTGGCACATGAGCAACGTGCAGACTTGGGTCAGTGCTGCTCTCACAGATGATAACACTTGTCTTGATGGCTTTGCCGGTCCTTCCATGAATGGAAATGTTAAGGATGCTTTCAAGGATAGAATTGTCAATGTTGCTCAAGTTACCAGCAACGCACTCTGA 558 0.4731 MAATGRVSILVLMSLVTYMSGTAESSITSAEFIKSSCRSTRYPVLCVQCLMGYASVIGQSERQLAITAISVSISRTRSSASYVKKISKARGVKPREYRAIQDCIENMGDSLDSLSQSVRELGSIGHAVGEDFEWHMSNVQTWVSAALTDDNTCLDGFAGPSMNGNVKDAFKDRIVNVAQVTSNAL 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g07762 185 CDD PMEI-like_3 35 185 - -
Vifa1g07762 185 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 31 185 IPR035513 -
Vifa1g07762 185 PANTHER PECTINESTERASE INHIBITOR-LIKE 11 185 - -
Vifa1g07762 185 FunFam Pectin methylesterase inhibitor 1 28 185 - -
Vifa1g07762 185 NCBIfam pectinesterase inhibitor domain 10 185 IPR006501 GO:0004857
Vifa1g07762 185 SMART PMEI_2 28 185 IPR006501 GO:0004857
Vifa1g07762 185 Gene3D Invertase/pectin methylesterase inhibitor family protein 27 185 IPR035513 -
Vifa1g07762 185 Pfam Plant invertase/pectin methylesterase inhibitor 32 185 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g07762 Vifa-Chr1 1211207379 1211207936 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g07762 26 185 Carbohydrate Esterase AT3G14310 31.677 6.29e-23 93.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g07762 - - psat:127120659 333.569