Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g07749 ATGGCTGGTGGTTGGGTCAAATCATTGCAATGCAAATCCAAAGCTTTTGAAGATGTTTACAACCCAAACACAAAAAACAGAATACACAACACAAGCTGTAAAATGAGTGTTCAAAACATCAAAGATGTTGTCGTTGAAACGACAAAACATAAACCTAAACCGAAACCAAAACCTAAAAAACCGCTTCAGAAACATCATAGTTCAAGATATCCAACAGCCTCCACCAAACCCGATTTCGAATCCACCATGAACCGTTCAAGTAGCACCAACGCAATCGCAACCACCACCACCAACCGCCACCACCCGGTGTCAGACCCTCGTTTCTCTTCTCTGACAGAGCTTACAGAAGGTCATCCTTCTCGCAACGTGGTGGAGATAATCTTTCACACTAGCTGGGGACCGAAACCGTTTTCGGGTCGGGTTGAGATGATTTTCAAGGTTCACAACGGTTCAAGAACGGTTTCCCGGTTCGAAGAGTATCGTGAAGCGGTAAAAGCCCGGTCTGGTTCGGTTAACTCGGATTCAGAGGATAATCATGAGGAGAATGCGCGGTGTGTTGCGGATGGGAATGAAGTGATGAGGTTTCATTGCTTGGGTCCCACTTCTGGCGGTGGTCCCTACGGTGGAGCTAGTGTGGGGTTGTTTCCAGGTGGGAAAGGTACGGCGATCTGCACATTTTCTGGAAGCAGTGGGGCGCATGAGAGCTCTGGTTGTGGTAGGGGAAGAAGGGCTATGTTGGTTTGTCGGGTCATAGCGGGTCGGGTTTCGAAGCAAACCGGGTTTATGGACTCGTTGTTGGATGGGCGAGTTGGATTCGACTCGGTGAGTGGGGACAATAGCGAGTTATTAGTTTTTGATTCGCGTGCTGTATTACCTTGTTTTCTTATCATTTATAAATTGTAA 903 0.4729 MAGGWVKSLQCKSKAFEDVYNPNTKNRIHNTSCKMSVQNIKDVVVETTKHKPKPKPKPKKPLQKHHSSRYPTASTKPDFESTMNRSSSTNAIATTTTNRHHPVSDPRFSSLTELTEGHPSRNVVEIIFHTSWGPKPFSGRVEMIFKVHNGSRTVSRFEEYREAVKARSGSVNSDSEDNHEENARCVADGNEVMRFHCLGPTSGGGPYGGASVGLFPGGKGTAICTFSGSSGAHESSGCGRGRRAMLVCRVIAGRVSKQTGFMDSLLDGRVGFDSVSGDNSELLVFDSRAVLPCFLIIYKL 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g07749 300 Gene3D - 109 299 - -
Vifa1g07749 300 MobiDBLite consensus disorder prediction 67 107 - -
Vifa1g07749 300 MobiDBLite consensus disorder prediction 46 107 - -
Vifa1g07749 300 SUPERFAMILY ADP-ribosylation 110 299 - -
Vifa1g07749 300 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 5 298 - -
Vifa1g07749 300 MobiDBLite consensus disorder prediction 52 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g07749 Vifa-Chr1 1208982303 1208983205 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g07749 110 300 C2H2 Transcription Factor Family AT1G75710 34.298 1.22e-30 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g07749 - - gmx:100804686 422.165