Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g07746 ATGTCAGCTTACACAAACCAGGATCCTCGTCTTCACGGCATCAAAACTAAAATCCGTGTCGTCCCCAACTTTCCTAAATCCGGTATCATGTTCCAAGACATTACCACTTTGCTACTGGATCCCAAAGCTTTCAAAGACACAATTGATTTGTTCGTTGAACGTTACAAAGGCAAAAACATTTCTGTTGTTGCAGGAATTGAAGCTCGAGGTTTCATTTTTGGTCCTCCCATTGCTTTGGCTATTGGAGCAAAGTTTGTACCGTTGAGGAAACCAAAGAAGTTGCCAGGCAAAGTTATATCTCAAGAATATATTCTGGAATATGGAAGCGATTGTCTTGAAATGCATGTTGGAGCTGTTGAAGCTGGTGAACGTGCTATTGTTGTTGATGATTTGATTGCAACAGGTGGAACACTCTGTGCGGCTATGGATTTACTCGAACGTGTTGGAGCGGAAGTAATGGAGTGTGCATGTGTAATTGAATTGCCAGAACTAAAGGGTCGTGAACGACTGAATGGGAAGCCATTGTACGTGTTGGTGGAATACTTTGATGATATATGA 558 0.4194 MSAYTNQDPRLHGIKTKIRVVPNFPKSGIMFQDITTLLLDPKAFKDTIDLFVERYKGKNISVVAGIEARGFIFGPPIALAIGAKFVPLRKPKKLPGKVISQEYILEYGSDCLEMHVGAVEAGERAIVVDDLIATGGTLCAAMDLLERVGAEVMECACVIELPELKGRERLNGKPLYVLVEYFDDI 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g07746 185 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 5 180 - -
Vifa1g07746 185 Hamap Adenine phosphoribosyltransferase [apt]. 14 181 IPR005764 GO:0003999|GO:0005737|GO:0006168
Vifa1g07746 185 Gene3D - 2 182 IPR029057 -
Vifa1g07746 185 SUPERFAMILY PRTase-like 12 175 IPR029057 -
Vifa1g07746 185 FunFam Adenine phosphoribosyltransferase 1 2 181 - -
Vifa1g07746 185 Pfam Phosphoribosyl transferase domain 50 167 IPR000836 -
Vifa1g07746 185 CDD PRTases_typeI 48 180 IPR000836 -
Vifa1g07746 185 NCBIfam adenine phosphoribosyltransferase 14 181 IPR005764 GO:0003999|GO:0005737|GO:0006168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g07746 Vifa-Chr1 1207894024 1207896362 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g07746 1 180 PRT Gene Family AT1G27450 75.000 3.00e-97 278
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g07746 K00759 - gmx:100306411 348.591