Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g07722 ATGGCTAACGCTACTCTTTTCCATTCACTGCGATTATTTTTGGTTTTCACTTGCATGTTGTTAAATGCAGGAATACTGACAAATGGTGCACGCTATCACGACAAAACCTTCAACTATTTATCTTCTTCAAACTCCTCCAACAACAACCACCCTTGGATCGGACCTGTTGGTCACCGCGTAATAACGGTTGACGTCAACGGCGGAGGCCAGTTCAGTTCCGTTCAAGATGCCGTCAATGCTGTCCCCGACAACAACACAATGAACGTGCTTATTAAAATCAGCGCTGGAAAATACAAAGAGAAAGTGGTGGTTCCCGTGACGAAACCGTTCATAACGTTTCATGGTGAAGGGAGAGAGGTGACAGTGATAGAATGGCATGATAGAGCGAGTGATCCTGGTCCCAATGGACAACAGCTACGGACTTATAGAACTGCTTCTGTTACTGTTTTCGCTAATTTTTTCTCTGCAAAAAATATCACCTTCAAGAACACGGCACCAGCACCGATGCCGGGGATGCAGGGATGGCAAGCGGTGGCGTTTCGGATATCAGGCGACAAAGCTTACTTCTCCGGCTGTGGATTCTACGGTGCACAAGATACACTTTGCGATGATGCTGGTAGGCATTACTTCAAAGAATGCTACATTGAAGGTTCCATTGATTTCATCTTTGGAAATGGCAGATCCATCTACAAGGATTGTGAACTACATTCGATAGCATCGAGGTTCGGATCTATAGCAGCACAGGATAGAAATGACCCAACAGAGAAAACAGGCTTCGCATTTGTACGATGCAAGGTTACGGGCTCAGGCCCATTATATGTGGGCCGGGCAATGGGCCAATACTCGAGAATAGTATACGCATACACATACTTCGATAATATAGTTGCACACGGTGGTTGGGATGATTGGGATCACGCCAACAACAAAAACAAGACTGTGTTCTTTGGAGTGTATAAATGTTGGGGACCAGGTGCAGATGCAGTACGTGGGGTGTCGTGGGCCCAAGAGTTGGATTTCGAATCTGCACATCCATTTATCAGGAAAAGCTTCGTCAATGGAAGACATTGGATAGCCCCCAATGATGCTTAG 1089 0.4591 MANATLFHSLRLFLVFTCMLLNAGILTNGARYHDKTFNYLSSSNSSNNNHPWIGPVGHRVITVDVNGGGQFSSVQDAVNAVPDNNTMNVLIKISAGKYKEKVVVPVTKPFITFHGEGREVTVIEWHDRASDPGPNGQQLRTYRTASVTVFANFFSAKNITFKNTAPAPMPGMQGWQAVAFRISGDKAYFSGCGFYGAQDTLCDDAGRHYFKECYIEGSIDFIFGNGRSIYKDCELHSIASRFGSIAAQDRNDPTEKTGFAFVRCKVTGSGPLYVGRAMGQYSRIVYAYTYFDNIVAHGGWDDWDHANNKNKTVFFGVYKCWGPGADAVRGVSWAQELDFESAHPFIRKSFVNGRHWIAPNDA 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g07722 362 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 56 358 - -
Vifa1g07722 362 ProSitePatterns Pectinesterase signature 2. 215 224 IPR033131 -
Vifa1g07722 362 Gene3D - 57 361 IPR012334 -
Vifa1g07722 362 FunFam Pectinesterase 56 359 - -
Vifa1g07722 362 Pfam Pectinesterase 61 353 IPR000070 GO:0030599|GO:0042545
Vifa1g07722 362 SUPERFAMILY Pectin lyase-like 57 359 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g07722 Vifa-Chr1 1201302753 1201304523 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g07722 9 362 Carbohydrate Esterase AT5G47500 72.316 0.0 545
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g07722 - - cam:101501763 674.085
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g07722 1 1201302753 1201304523 Vifa1g07722 1 1201302753 1201304523 ECH