Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g07718 ATGGGGGTGGTGGAAGATGTAACATTGATTGGAGGGTTGATAGCAGTTCAATTTATCTATGCAGGAAATGCTGAGTTGATGAGTTATTCAATGTCATTAGGAATTAGTCCTCTCACCATTGTTGTTTTCACTTCCATTTCTACATTTCTTATTCTTTTTCCTGCTGCATTTTGTTTTGAAAGGACTAAGTGGCCCAAGAATTTCAGTTTAAAGTTTATGATGCAGATATGGTTTCTTTCATTTGGAGGATTAGCTTTCCAGTTTTTTTTCTTGAAAGGAATCAATCTAACTTCTCCAGCAATGGGAACTGCTATGCCAAACCTTGCACCAGGTCTTATCTTCATTATCGCATGGACTTTTGGGTTAGAGAGAGTTAACTTAAGCAACAAGTATAGTAAATTAAAAATCATAGGAACATTGCTATGTGTATTGGGAGCTCTTACAATGAGCATAATGCAAAGCATTTCTGCTCCTGCAACCAAAAAAGAGGTTACACTTCTTCAATCATCATCTGCACCATCAAAGCTTCTCTTTGACACGAAAAAGATAATTGGTTGCATCTATCTAGTGATTTCAGTTTTAATATTGTCAAGCAGTGTTGTCCTACAGGCTTTCGCTCTTGGAGGTTTTCCTGCACCAATGTCATTGAGCGCGATAACGTCGTTGTTTGGAGGATTCATGACTGCAGTTGTTCAAAAATTTCAAGGTGACGACCTTAAATCTGGTTTGCAACTCGTGAGTTTGGGAGATATCATAGGCTTCTCCATTCTGGCAGGTGGAGTGAGTGGAATAAGCCTAAGCTTCAATGCATGGGCACTTAAGAAGAGAGGGCCAGTTTTTGTCTCCATGTTTAGCCCAATTGGAACAGTATGTTCAGTTATTTTCTCAGTCTTCAGTGTTGGAGACACTGTTAATATTGGAAGCATTGGTGGTATGTTCCTTATGTTCAGTGGACTCTACATAGTTCTTTGGGCCAAAGGGAAAGAAGGATATGCAGATTTTGGTGGAGATTTCGCAGAGAAGATTGAAACAGTTGGTCCATTGGTGTATTGTGACAGAGCAGTAGGAAGAGTACCTGATAAGGAGTAG 1089 0.3949 MGVVEDVTLIGGLIAVQFIYAGNAELMSYSMSLGISPLTIVVFTSISTFLILFPAAFCFERTKWPKNFSLKFMMQIWFLSFGGLAFQFFFLKGINLTSPAMGTAMPNLAPGLIFIIAWTFGLERVNLSNKYSKLKIIGTLLCVLGALTMSIMQSISAPATKKEVTLLQSSSAPSKLLFDTKKIIGCIYLVISVLILSSSVVLQAFALGGFPAPMSLSAITSLFGGFMTAVVQKFQGDDLKSGLQLVSLGDIIGFSILAGGVSGISLSFNAWALKKRGPVFVSMFSPIGTVCSVIFSVFSVGDTVNIGSIGGMFLMFSGLYIVLWAKGKEGYADFGGDFAEKIETVGPLVYCDRAVGRVPDKE 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g07718 362 SUPERFAMILY Multidrug resistance efflux transporter EmrE 247 327 - -
Vifa1g07718 362 PANTHER WAT1-RELATED PROTEIN 12 330 IPR030184 GO:0016020|GO:0022857
Vifa1g07718 362 Pfam EamA-like transporter family 14 150 IPR000620 GO:0016020
Vifa1g07718 362 Pfam EamA-like transporter family 184 323 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g07718 Vifa-Chr1 1200098616 1200100781 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g07718 3 333 Nodulin-like Gene Family AT5G47470 55.255 2.21e-125 364
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g07718 - - aprc:113870214 476.478
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g07718 1 1200098616 1200100781 Vifa4g02913 4 935050429 935052759 PCT