Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g07671 ATGAATTCACTCTTCTTTCTCACCATCTTCTTGGTTTTCATCTTCCAAACCTCTGTAACTGGTGTTGACATTCACTATCCCTTCACCACCCTTTCTGGTTTCGACCTTTTTCACAAAGACAACATCACCACCATCCATTTTCCATCCTACGGCGATCTGACAGTCAAGTCCATCTCCTATGACAGCAGAAAGATTGATCTTCTTGATCCAAAGAACTGTGTCCCCAGAGTCTTTCTCAACCTCAACCTCACCCTCACTCCGTTTCAATACTATTACGTTCTTCAAAACTATACCTACCTCAATTGCTCCACTACACTTCCACATACAAATTTCATGGAAGTTCCATGTTTAAGCGATTCAAACTCTCATGTTTATACAGTTGACCCTCAAGTTTCTATTCCTAGTTCATGTAAAAGAGTCAAAACAGTTGCTATTCCTTTCAAATATAGTCCTTATATTTCAGATAACAGTCTTGGTCTTAGATTAACATGGAAGTTGCGTGAGCCTGAAGAAATCAAACAAGGAAACAAGACTAGAGATTCTTACACAGCACGCAATACTGTTTTTGGCCTTAGCATCTGTTTTATGGTGATGGCAACAATTGTAGGCATCATAAAGGTTCATCTGTTTACGAAGAATTTACATAAGAAAGAAGAACAGTTGTTGGGAGATTTCTAG 678 0.3879 MNSLFFLTIFLVFIFQTSVTGVDIHYPFTTLSGFDLFHKDNITTIHFPSYGDLTVKSISYDSRKIDLLDPKNCVPRVFLNLNLTLTPFQYYYVLQNYTYLNCSTTLPHTNFMEVPCLSDSNSHVYTVDPQVSIPSSCKRVKTVAIPFKYSPYISDNSLGLRLTWKLREPEEIKQGNKTRDSYTARNTVFGLSICFMVMATIVGIIKVHLFTKNLHKKEEQLLGDF 225
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g07671 225 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 4 177 IPR046948 -
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g07671 12 179 C3H Transcription Factor Family AT2G25410 29.570 9.94e-15 70.5
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g07671 - - gmx:100818574 272.322