Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vifa1g07667 | ATGGCTTCCTCTACCCTTTACATGATTTTCATTCTCTTTCTTCAACTTATGTTAGTCCATGGAAACATTGCTCCAATCTCAACACTCACTGCCACCACCAACAATAACAATTCATGGCTATCACCTTCTGGTGAATTCGCCTTCGGGTTTCGCCAACTTAACACCTCAACAAACCCTTTCATGCTTGCAATATGGTACAACAAAATACCTGATAAAACCGTTGTTTGGACTGCCAGAGACACAAACAACAATAACAATCTCTTACAAGTACCAACGGGATCAAAGATTCAGTTAACATCAGGAGGACTTACTTTGACAACTCCACAAGATATGACCATTTGGACAGCACAGCCAAACGCTGTCGTTTCCTATGGAAACATGCTTGACACCGGAAACTTTGTTCTTGTAAACAACATTTCAACTGTTTGGGAAAGTTTCAAGTTGCCTACTGATACCCTTTTGCCTAATCAATCTCTTGGGTTAAGTAACACCTTAACTTCAAGATTATCAGAGAACAACTTTACAAGTGGAAGGTTCCAGCTTTATTTTAATGGTGCTGATAAAAATCTCATGTTAAGTCCACTTGCATGGCCTACTCAATTTCGTTACGATTCTTACTATAAAATTGATGTTCCTAACTCGGCTTCTTCGAGTTTGGTTTTTAATGAATCAGGAGATGTTTATGTGGAAACAAATAATGGGACTAGAATGAAACCACAGGGTGCACAGTGGGGCAATTTGGATTCTGATCCTAAGTTGTATTATTATAGAGCAACGCTTGATTATTATGGAGTTTTCACTCAATATTCTCATCCAAGAGATACAAAGGCAAAGCAAGATTGGACTATTGTGAGGTATGTTCCTGAGAACATTTGCAATGATGTGGACTATGAAATGGGTGGTGGTTCTTGTGGTTATAATAGCTATTGCTCCATGGACAATCAGAGACCTACTTGTAAATGTCCTTATGGTTACTCACTGGTAGATCCGAGTAATCGATTTGGTGGGTGTCAACTGAACTTCACACTTGGTTGTGGAGCTGATAATGGTGAAGGATTGAATGTGAGGCTAGAAGATTTATATGAGTTTACTGAACTTAAAGGTGTAAATTGGCCTTTATCAGATTATGGAAGGCTGCAACCTTATTCTCAACAGGAGTGTCAACAATCTTGTTTGCATGATTGTTTGTGTGCTGTTGCTGTTTTCAATGACCAAACTTGTTGGAAGAAAAAATCGCCTCTTGTCAATGGAAGAGAAGAAAATGGTGACCATATAGTACTTATTAAAACAAGAGTTTCTCCTCTTGGTAAAATAGGTACTGGTTCTTACACTGACTTGACAAAAGACGATGTTAATCGGACTCTTCGAGGACTACTTATTGGTTCAGCAGTCTTCAATAGCATATTCTTGGCTGTGATTGTTTTCGTCATTTTGTTGAAGCCGAAAAGGGTTGTTGTCCAAGGTGCAACTCTCTTGGAAACAAATTTATGTTCCTTTAGTTATGAAGCATTAAAAGAAGCTACGCAGGGTTTTAATGAAGAACTAGGTAGAGGTTCCTTTGGAATTGTTTACAAAGGTGAATTAAAAGCAGCATCATCTAGTAATGTTGTTGCTGTTAAGAGATTGGATCGGTTAGCACAAGACCGCGATAAGGAATTCAAGACCGAGTTGAGTGCCATTGGTAAAACCTGCCACAAAAACTTGGTAAGGTTGATTGGATTTTGTGATGAGGGAATCCATAGAATGTTGGTGTATGAGTTCATGAGCAATGGTAGTCTTGCAGATATCTTGTTTGGACAATCCAAACCCAAGTGGAATCAAAGGGTTGGATTTGCTTTGGGGATTGCAAGAGGGTTGGTGTACTTACATGAAGAGTGTGACACTCCCATCATTCACTGTGACATAAAGCCTCAAAATATACTCATAGATGAGTACTTTACAGCTAAGATCTCTGATTTTGGACTGGCCAAGTTATTGTTGGCTGATCAGAGTAGAACAAATACAATGATCCGCGGAACGCGGGGTTATGTGGCTCCTGAATGGTTCAAGAATGTTCCTGTGACAGCTAAAGTGGATGTTTACAGCTTTGGCTCCATGTTGTTGGAAATTGTTTGCTGCAGAAAAAGTGTGGTGCTGATGGAGCCAGGGGAGGAAGAGAAGACAATTTTGGCAGATTGGGCTTGTAATTGCTATATGGAAGGGAGAATAGATGCTCTTGTGGAGAATGACCAAGAGGCCTTGGATGACATTGGAAGGCTAGAAAAGTGGATAAAGATAGCAATTTGGTGCATTCTTGAGCATCCTGAAACAAGGCCAACGATGAGGATGGTCGTGCAAATGCTAGAAGGTGTTGTTCAAGTCCCTAATCCACCATCACCTTTCTCCTACAGTTCAATTCCTTGA | 2403 | 0.3999 | MASSTLYMIFILFLQLMLVHGNIAPISTLTATTNNNNSWLSPSGEFAFGFRQLNTSTNPFMLAIWYNKIPDKTVVWTARDTNNNNNLLQVPTGSKIQLTSGGLTLTTPQDMTIWTAQPNAVVSYGNMLDTGNFVLVNNISTVWESFKLPTDTLLPNQSLGLSNTLTSRLSENNFTSGRFQLYFNGADKNLMLSPLAWPTQFRYDSYYKIDVPNSASSSLVFNESGDVYVETNNGTRMKPQGAQWGNLDSDPKLYYYRATLDYYGVFTQYSHPRDTKAKQDWTIVRYVPENICNDVDYEMGGGSCGYNSYCSMDNQRPTCKCPYGYSLVDPSNRFGGCQLNFTLGCGADNGEGLNVRLEDLYEFTELKGVNWPLSDYGRLQPYSQQECQQSCLHDCLCAVAVFNDQTCWKKKSPLVNGREENGDHIVLIKTRVSPLGKIGTGSYTDLTKDDVNRTLRGLLIGSAVFNSIFLAVIVFVILLKPKRVVVQGATLLETNLCSFSYEALKEATQGFNEELGRGSFGIVYKGELKAASSSNVVAVKRLDRLAQDRDKEFKTELSAIGKTCHKNLVRLIGFCDEGIHRMLVYEFMSNGSLADILFGQSKPKWNQRVGFALGIARGLVYLHEECDTPIIHCDIKPQNILIDEYFTAKISDFGLAKLLLADQSRTNTMIRGTRGYVAPEWFKNVPVTAKVDVYSFGSMLLEIVCCRKSVVLMEPGEEEKTILADWACNCYMEGRIDALVENDQEALDDIGRLEKWIKIAIWCILEHPETRPTMRMVVQMLEGVVQVPNPPSPFSYSSIP | 800 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vifa1g07667 | 800 | Gene3D | Phosphorylase Kinase; domain 1 | 478 | 587 | - | - | |
Vifa1g07667 | 800 | CDD | STKc_IRAK | 515 | 783 | - | - | |
Vifa1g07667 | 800 | Pfam | D-mannose binding lectin | 73 | 164 | IPR001480 | - | |
Vifa1g07667 | 800 | PANTHER | G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 | 29 | 793 | - | - | |
Vifa1g07667 | 800 | ProSitePatterns | Protein kinases ATP-binding region signature. | 515 | 540 | IPR017441 | GO:0005524 | |
Vifa1g07667 | 800 | ProSiteProfiles | Protein kinase domain profile. | 509 | 785 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vifa1g07667 | 800 | SMART | serkin_6 | 511 | 781 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vifa1g07667 | 800 | FunFam | S-receptor-like serine/threonine-protein kinase | 480 | 587 | - | - | |
Vifa1g07667 | 800 | SUPERFAMILY | Protein kinase-like (PK-like) | 494 | 782 | IPR011009 | - | |
Vifa1g07667 | 800 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 630 | 642 | IPR008271 | GO:0004672|GO:0006468 | |
Vifa1g07667 | 800 | FunFam | G-type lectin S-receptor-like serine/threonine-protein kinase | 588 | 789 | - | - | |
Vifa1g07667 | 800 | SUPERFAMILY | alpha-D-mannose-specific plant lectins | 60 | 199 | IPR036426 | - | |
Vifa1g07667 | 800 | SMART | blect_4 | 30 | 149 | IPR001480 | - | |
Vifa1g07667 | 800 | Gene3D | Transferase(Phosphotransferase) domain 1 | 588 | 787 | - | - | |
Vifa1g07667 | 800 | PIRSF | SRK | 1 | 799 | IPR024171 | GO:0004674 | |
Vifa1g07667 | 800 | FunFam | G-type lectin S-receptor-like serine/threonine-protein kinase LECRK1 | 18 | 147 | - | - | |
Vifa1g07667 | 800 | Gene3D | - | 27 | 147 | IPR036426 | - | |
Vifa1g07667 | 800 | Pfam | PAN-like domain | 362 | 416 | IPR003609 | - | |
Vifa1g07667 | 800 | ProSiteProfiles | Bulb-type lectin domain profile. | 24 | 148 | IPR001480 | - | |
Vifa1g07667 | 800 | Pfam | Protein kinase domain | 512 | 779 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vifa1g07667 | Vifa-Chr1 | 1192236305 | 1192238707 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vifa1g07667 | 454 | 791 | Receptor kinase-like Gene Family | AT3G53380 | 37.960 | 1.51e-65 | 230 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_SD-2b | Vifa1g07667 | Pkinase | 3.3e-47 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vifa1g07667 | - | - | lja:Lj2g3v1989170.1 | 1070.46 |