Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g07664 ATGTGCCGGCAAAATTCTCCGGTGCATAATTCCGCTGAAGAAGAAATTTCAGCTGATGAGAGTCTTTTGATTTATTGCAAGCCTGTTGAATACTACAATATTATCTACCGTCGTTTTCTTCACAATCCTAGTTTTCGGAAGAAATGTTTGAGCTATAAAATCAAAGCAAGGCGTAATAGGAGGTCGCGAGCTGGAATTGTGATTTTCAACTATAGGGACTGTTACAACATGCTTCGGAAGACTGAAGTGACGGAAGACTTCTCTTGTCCATTTTGCTTAATGCAGTGTGCGAGCTCTAAGGGCTTGCGTTTACATCTTTGTGCATCCCATGATCTGTTCAACTTTGAGTTCTGGGTCACCGATGATTACCAAGCAGTGAACGTCTCTGTGAAAATTGACATATTGAGATCCGAGAATGTTGCCGATGGAGTAACTCCACAATCAGAAACCTTCTTCTTCTGTTCAAGACCTCTAAAGCGCCGCAGAGAAAATGACACTGTTCAAAATGAAAAGCAGGCCAATGTAAAGTTCCTGAAGTTGGATTCACCAGAAGGCACACAGAATGGGATACTACATAAAGACAATGGTATCCTGTCCTACAAAGGGGAGAATATGTCTAGAGCATCTCACACTGATTTGCAAAATGATGGAAATGGCGGGGTAAAATTTGGTCCTGATCATCCTAGCACCAAGGATCACCTGGAACATGTAGAATGTAGTGTTAACAATACAGGTGTTTCAATTGCCATGCCCCAATCTTCTGAGGACCCTGAATGTGGCAAATCAATACATAGAAGTGATCCTGCTCTGCCTACTAAAGCAAAGAAGTTAAATACGGACCGTTCAGACTCAAAGAATCGGATCCTCCTGCAGAAGAGGCAGTTCTTTCACTCACATAGAGTTCAGCCCATGGCACCAGAACAAGTGGTATCTGATCGTGATAGTGAAGATGAAATGGATGATACAGTTGCTAACCTGGAAGATAGAAGGATGCTTGATGATTTTGTGGATGTTTCCAAAGATGAAAAGGAGTTCATGAATCTCTGGAACTCTTTTATGAAGAAACAAAGGGTACTGGCGGATGGTCATATGCCGTGGGCTTGTGAGGCATTTTCCAAGCATCATGCAGAAGAGCTGATCTCATCCCGAGCTTTACATTGGTGTTGGTCATTATTCATGATCAAACTTTGGAATCATGGTCTTCTTGATGCGTGCACAATGAACAACTGCAGTTTAATATTAGAGCGCTTCAAAAACGGGGGATTGGACACTGTCGTATATTGA 1284 0.4221 MCRQNSPVHNSAEEEISADESLLIYCKPVEYYNIIYRRFLHNPSFRKKCLSYKIKARRNRRSRAGIVIFNYRDCYNMLRKTEVTEDFSCPFCLMQCASSKGLRLHLCASHDLFNFEFWVTDDYQAVNVSVKIDILRSENVADGVTPQSETFFFCSRPLKRRRENDTVQNEKQANVKFLKLDSPEGTQNGILHKDNGILSYKGENMSRASHTDLQNDGNGGVKFGPDHPSTKDHLEHVECSVNNTGVSIAMPQSSEDPECGKSIHRSDPALPTKAKKLNTDRSDSKNRILLQKRQFFHSHRVQPMAPEQVVSDRDSEDEMDDTVANLEDRRMLDDFVDVSKDEKEFMNLWNSFMKKQRVLADGHMPWACEAFSKHHAEELISSRALHWCWSLFMIKLWNHGLLDACTMNNCSLILERFKNGGLDTVVY 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g07664 427 MobiDBLite consensus disorder prediction 248 280 - -
Vifa1g07664 427 Pfam VEFS-Box of polycomb protein 277 411 IPR019135 -
Vifa1g07664 427 CDD ZnB-Zn_EMF2-like 13 134 - -
Vifa1g07664 427 PANTHER POLYCOMB GROUP PROTEIN 9 61 - -
Vifa1g07664 427 CDD VEFS-box_EMF2-like 290 416 - -
Vifa1g07664 427 MobiDBLite consensus disorder prediction 258 280 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g07664 Vifa-Chr1 1191796297 1191805135 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g07664 1 68 C2H2 Transcription Factor Family AT5G51230 51.471 5.94e-10 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g07664 - - gmx:100807112 674.47