Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g07621 ATGATTCCGAAGCAAGTTCGAGAAATCAAGCTTCGCGTAACAACGACTCCACTCGTTTATCGCTTACTCACTTCCTCGATCGCAAACTGCACAACTCTTCAACAGTCCCTCAAACCGTTCTGTGAGCAAGATGGAAGCGTCAAACTAAATGATCAAGTAGGCACCATGTCTCTGATTTCATACTATGTATGTCGTTCATTGTCATATGCTTCTTTAGGAAACTTCAATGTATGCCATTATTTCAGATTTTTTGAGTTTGGTCAGGGCATGGGGCATGAGTTGACTTGGGGCAAGAGCTATAAGGTTAAGCAGGATGGATTCTTTCCTGCAGATTTACTTTTCTTGGCCAGTACAAATGCAGATGGTGTCTGCTACATTGAGACTGCTAATTTGGACGGGGAGACCAATTTGAAGATTAGGAAAGCATTGGAAAAGACCTGGGATTACCTGACCCCAGAGAAGGCATCCAAGTTTAAAGGTGAAATTCAATGTGAACAACCGAACAATTCCTTGTATACATTTACCGGAAATCTTTTGATTCAAAAGCAGACACTTCCACTGCCCAAACCAGATTCTTTTGCGATTTTTTATTGTTGTTTTTTTCAAGAGGACGACGTAGATGACGAATTTCAAGAGGACGACATAGATCTAGATGATGAATTTCAAGAGGAGGATATAGATGGTGAATTTCAAGAGGACGACGTAGATGAAGAATTTATGGAGGATGACATATCTAACGAATTTCAAGAGGACGATCTGGATGCTTTACTCCTAGAAGACAAACTTGAATGA 792 0.4053 MIPKQVREIKLRVTTTPLVYRLLTSSIANCTTLQQSLKPFCEQDGSVKLNDQVGTMSLISYYVCRSLSYASLGNFNVCHYFRFFEFGQGMGHELTWGKSYKVKQDGFFPADLLFLASTNADGVCYIETANLDGETNLKIRKALEKTWDYLTPEKASKFKGEIQCEQPNNSLYTFTGNLLIQKQTLPLPKPDSFAIFYCCFFQEDDVDDEFQEDDIDLDDEFQEEDIDGEFQEDDVDEEFMEDDISNEFQEDDLDALLLEDKLE 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g07621 263 SUPERFAMILY Calcium ATPase, transduction domain A 92 147 IPR008250 -
Vifa1g07621 263 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 92 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g07621 Vifa-Chr1 1183378422 1183381986 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g07621 92 198 Primary Pumps ATPases AT1G59820 72.897 7.41e-49 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g07621 K14802 - mnt:21394275 175.637