Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g07570 ATGGCGAGAAGTAACCAACTCAACCCTAGTGATTCAAGGATGGTGGTTCCTTTAAACATGTGGGTTTTAATCTCGAATTTCAAGTTAGCATACAATCTTCTTCGTCGTCCTGATGGAACTTTCAACCGTGACTTGGCGGAGTTTCTTGATCAGAAAGTTCCGGCGAATGCAAACCCTATGGATGAAGTGTTTTCTTTTGATGTGATTGTTGACATGGAAACTAATTTTCTTACTCGAATTTATCATTATGTTGAGGGAGATGAAAGTGTGAACATTGTTGATCTTGAGAAGCATGTTACCTCTGAGGTTGTGCTGGTTTTGATGTTCTTCCATGGAGGAAGTTTTGCGCATTCTTGGATTCGAATCAAGGACTTGGACTCGAGCAACCAGTTTTGCACGAGTCTTCAAGCTGGTGATTCCCTCAAGTTCATCTTCCGCGAGCAGCATGACAACCATCAAATCAACGACCTCCTTCTCCAGGTTTTTTCTCTCGAGAAACAATGA 504 0.4206 MARSNQLNPSDSRMVVPLNMWVLISNFKLAYNLLRRPDGTFNRDLAEFLDQKVPANANPMDEVFSFDVIVDMETNFLTRIYHYVEGDESVNIVDLEKHVTSEVVLVLMFFHGGSFAHSWIRIKDLDSSNQFCTSLQAGDSLKFIFREQHDNHQINDLLLQVFSLEKQ 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g07570 167 Gene3D alpha/beta hydrolase 1 138 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g07570 Vifa-Chr1 1175559839 1175560342 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g07570 1 118 Carbohydrate Esterase AT3G05120 62.500 2.79e-48 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g07570 K14493 - gmx:100815161 197.593