Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g07565 ATGGAGCTTTTGAAACTGTTACTAATCCTAATTACTATTCTGTCTAATGTTCTAACTTTAAGGAGTAGTGAACTTCTTGTTCATGAGTACTACAAGGAAAAGTGTCCCTTAGCTGAAGAGATAGTGAGACATAACATGGAAGTCGCAATTTATAAAGATCCACGTTTAGCGGCGTCACTACTTCGATTACACTTCCATGATTGTTTTGTCATGGGGTGTGATGCATCAGTACTTTTGGATAGTGTTGAGGGAATGACGAGTGAGAAACAAGCTGGACCGAATTTGAATTCTTTACGCGGTTTTGAAGTCATTGACAAGATAAAGTATTTGCTTGAAGAGGAATGTCCTCTCACTGTTTCATGTGCTGATATTCTTGCTATGGCTGCTCGTGATGCTGTTGAATTGAGAGGAGGACTAAGATGGGAAGTGTGGCTGGGGAGGAAGGATTCCCTAGAGTCAAGTTTCAGTGGAGCTAACCTATTCATCCCTGCTCCAAATTCTTCTTTACAGACCTTAATTAACAATTTTAAGCAACAGGGTCTTGACATTGAAGACTTGGTTGTTCTATCAGGTAGCCATACTATAGGAAGGGCAAGATGTGTAAGTTTCAGGCAAAGGATCTATGAAACAAAACAAGAATATCACTATGGCTATGACTATGATCATGATCGCTACAAAAGATACACAACCTTCAGAAGAATCCTAGGGTCAATATGTCCCGTTAAAGGAAGGGACAACAAATTTGCACCCCTTGATTTTCGAACACCGAAAAGATTTGATAACCACTACTTTATTAACATTCTTGAAGGAAAGGGATTGTTAGGTTCTGATAATGTTTTGATCAACCAAGACTTGGATGGAAAGATCAGGGAACGGGTGTTGAGTTATGCCTCAGATGAAAAACTTTTCTTTGCTTCATTTGCTAAGTCTATGATTAAGATGGGAAACATCAATGTTCTTACCGAAGATGCAGGAGAAATAAGAAGGAACTGTAGGGTTGTCAACACATAG 1011 0.3917 MELLKLLLILITILSNVLTLRSSELLVHEYYKEKCPLAEEIVRHNMEVAIYKDPRLAASLLRLHFHDCFVMGCDASVLLDSVEGMTSEKQAGPNLNSLRGFEVIDKIKYLLEEECPLTVSCADILAMAARDAVELRGGLRWEVWLGRKDSLESSFSGANLFIPAPNSSLQTLINNFKQQGLDIEDLVVLSGSHTIGRARCVSFRQRIYETKQEYHYGYDYDHDRYKRYTTFRRILGSICPVKGRDNKFAPLDFRTPKRFDNHYFINILEGKGLLGSDNVLINQDLDGKIRERVLSYASDEKLFFASFAKSMIKMGNINVLTEDAGEIRRNCRVVNT 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g07565 336 PRINTS Haem peroxidase superfamily signature 57 71 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa1g07565 336 PRINTS Haem peroxidase superfamily signature 119 136 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa1g07565 336 PRINTS Haem peroxidase superfamily signature 137 149 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa1g07565 336 PRINTS Haem peroxidase superfamily signature 185 200 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa1g07565 336 PRINTS Haem peroxidase superfamily signature 252 267 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa1g07565 336 SUPERFAMILY Heme-dependent peroxidases 27 335 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vifa1g07565 336 ProSitePatterns Peroxidases active site signature. 57 68 IPR019794 GO:0004601
Vifa1g07565 336 Gene3D Peroxidase, domain 2 163 315 - -
Vifa1g07565 336 FunFam Peroxidase 163 314 - -
Vifa1g07565 336 CDD secretory_peroxidase 26 334 IPR033905 GO:0004601|GO:0042744
Vifa1g07565 336 PRINTS Plant peroxidase signature 184 196 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa1g07565 336 PRINTS Plant peroxidase signature 266 283 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa1g07565 336 PRINTS Plant peroxidase signature 35 54 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa1g07565 336 PRINTS Plant peroxidase signature 137 152 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa1g07565 336 PRINTS Plant peroxidase signature 250 265 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa1g07565 336 PRINTS Plant peroxidase signature 118 128 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa1g07565 336 PRINTS Plant peroxidase signature 59 79 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa1g07565 336 PRINTS Plant peroxidase signature 99 112 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa1g07565 336 PRINTS Plant peroxidase signature 309 322 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa1g07565 336 ProSiteProfiles Plant heme peroxidase family profile. 25 335 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa1g07565 336 FunFam Peroxidase 29 169 - -
Vifa1g07565 336 ProSitePatterns Peroxidases proximal heme-ligand signature. 185 195 IPR019793 -
Vifa1g07565 336 Pfam Peroxidase 43 298 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa1g07565 336 Gene3D - 30 335 - -
Vifa1g07565 336 PANTHER PEROXIDASE 72-RELATED 25 334 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g07565 Vifa-Chr1 1174688737 1174690330 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g07565 85 335 Peroxidase AT2G35380 65.737 2.70e-119 342
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g07565 K00430 - gmx:100778051 547.354