Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g07409 ATGGCTCACCATGATGAATCCGTTACTGTAGTTGTTAGAGAGTTTCAAGCTAACAAAGACACAGAAAGAGTAGTAACACTCGAAAACACATGTGAAGTTGGACCCACTAACAAACTTTCTCTCTTCACCGACATGCTCGGTGACCCCATTTGCAGACTCCGTAACTCACCTTCTTTTCTCATGCTGGTTGCTGAAATCGGCCAAGAGATAGTAGGAATGATAAGAGGATGCATCAAAACAGTCACATGCGGTAAAGGCCTCTCAAGATCAAAACCAACTCTCACTAAACAAATACCAGTTTACACCAAACTCGCATACATATTAGGCCTTCGAGTTTCTACTAATCACAGGAGAATGGGAATAGGGTTGAAGCTGATAAAGAAAATGGAAGATTGGTTTAAAGATAACGGCGCTGAATATTCATACATGGCAACAGAAAGTGAAAATTTAGCGTCCGTTAAACTCTTCACAGATAAATGCGGTTATTCAAAGTTCCGTACGCCGTCAATCCTTGTCAACCCCGTTTACGCTCACAGAACTAAAATTTCACGAAACGTTACTATCATTCCGTTAACTCCTACAGACGCCGTTACTCTCTATCGTAACCGTTTCTCCACTACCGAGTTTTTCCCTCGCGACATTGACTCGGTCGTTTATAATAAACTCAGTCTCGGTACTTTTCTTGCCGTACCACGTGGGTCCTACAGTGTTGAAACGTGGCCTGGGCCTGATAGGTTTCTTTTGGGCCCGCCTTGTTCTTGGGCCGTTTTAAGTGTTTGGAATTCTAAGCAAGTTTTTAGGTTGGAAGTACGTGGTGCGTCGCGTGTGAAGCGGGCTTTTGCTAAGACGACGCGGGTTTTGGATCAGGCTTTTCCGTGGTTGAAGATGCCGTCCGTTCCGAATTTGTTTAGGCCGTTTGGGTTTCATTTTTTGTATGGGCTTGGTGGGGAAGGCCCAAAGGTTGTTAAGATGGTTAAGGCTTTGTGTGGGTTTGCTCATAATATGGCTATGGAATGTGGGTGTGGGGTTGTGGCTACTGAGGTTGCTTCTTGTGAACCGCTTAGGTTTGGAATACCTCACTGGAAAATGCTATCTTGCACAGAGGATTTATGGTGCATCAAACGACTTGTGGAGGATTATAGTCATGATTCTCTTATTGGTGATTGGACTAAATCTGTCCCTGGAATCTCAATTTTTGTGGATCCTAGAGACATTTAA 1218 0.4384 MAHHDESVTVVVREFQANKDTERVVTLENTCEVGPTNKLSLFTDMLGDPICRLRNSPSFLMLVAEIGQEIVGMIRGCIKTVTCGKGLSRSKPTLTKQIPVYTKLAYILGLRVSTNHRRMGIGLKLIKKMEDWFKDNGAEYSYMATESENLASVKLFTDKCGYSKFRTPSILVNPVYAHRTKISRNVTIIPLTPTDAVTLYRNRFSTTEFFPRDIDSVVYNKLSLGTFLAVPRGSYSVETWPGPDRFLLGPPCSWAVLSVWNSKQVFRLEVRGASRVKRAFAKTTRVLDQAFPWLKMPSVPNLFRPFGFHFLYGLGGEGPKVVKMVKALCGFAHNMAMECGCGVVATEVASCEPLRFGIPHWKMLSCTEDLWCIKRLVEDYSHDSLIGDWTKSVPGISIFVDPRDI 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g07409 405 CDD NAT_SF 61 140 - -
Vifa1g07409 405 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 7 405 - -
Vifa1g07409 405 Pfam Acetyltransferase (GNAT) family 53 162 IPR000182 GO:0016747
Vifa1g07409 405 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 10 182 IPR000182 GO:0016747
Vifa1g07409 405 FunFam Probable N-acetyltransferase HLS1-like 19 169 - -
Vifa1g07409 405 Gene3D - 8 169 - -
Vifa1g07409 405 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 13 164 IPR016181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g07409 Vifa-Chr1 1140376555 1140378028 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Vifa1g07409 Acetyltransf_1 4.2e-17 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g07409 - - gmx:100800613 619.002
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g07409 1 1140376555 1140378028 Vifa1g07409 1 1140376555 1140378028 ECH