Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g07403 ATGCGTTGCAGACCTCATTGCTTTTTGTGCTTCTATTGCACAGTCTACGCCCTAATATTCTTCCTCATAATTACCTCAATAATCTTCTTGATAATAACCTCTCCCTCAAGCGTGAAATTCCATATAACCGACGCTACTCTTACCGAGTTCAACCTCACAAACAACAACCTATATTACAATTTCAAAGTCAACATGACAGCACGAAACCCTAACAACAACATCATAGTCTATTATCGAAGAATCACCGCGATTGCTTGGTACAAAGACAATGAATTCAGTTATGTGAGTTTGGTACCCTTTGATCAAGGACACAAGAATACATCATATCTTGGGCCTATAGAGTTCAAAGGGAACCGTGTGATTAATCTAGGACGTAAACAACTTGATGAGTACAGCGAAGAGACGCGTCTCGGGATTTACAATGATTTGGCTGTTGATTTGGATGTTCGAATTAGAGCTAAGTTTGGAAGCTTCTTTAAGAGTGGACGGTTTAATCCACCGGTTGTGCAGTGTCGTCGTTTGACCATTCCTTTGATTTCTGCTAACTCATCATCTTCATCAACAACATTTTCTTTTAGTGAGAGAAGATGTAGCAGCGCTTCTTTCTTTACAGATCGTGATGCAGAAGCAGGAGCTTGA 639 0.4022 MRCRPHCFLCFYCTVYALIFFLIITSIIFLIITSPSSVKFHITDATLTEFNLTNNNLYYNFKVNMTARNPNNNIIVYYRRITAIAWYKDNEFSYVSLVPFDQGHKNTSYLGPIEFKGNRVINLGRKQLDEYSEETRLGIYNDLAVDLDVRIRAKFGSFFKSGRFNPPVVQCRRLTIPLISANSSSSSTTFSFSERRCSSASFFTDRDAEAGA 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g07403 212 Pfam Late embryogenesis abundant protein 65 165 IPR004864 -
Vifa1g07403 212 PANTHER OS05G0367900 PROTEIN 9 184 IPR044839 GO:0098542
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g07403 Vifa-Chr1 1139535249 1139535887 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g07403 38 186 SNARE and Associated Proteins AT1G32270 31.579 2.33e-14 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g07403 - - gmx:100784278 238.81