Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g07387 ATGTCTCAGCTTAATCTTTTACTAATTTGGTTACTCTTCTTAACTCTCTGTCTTCATTCATGTCCTACTTATGCCCAATTAAGTCGACACCACTACAAAAACTCTTGTCCCAATGTTGAAAGCATTGTCAGAGAAGCTGTCAAGAAGAAATTTCATCAAACATTTACAACCATTCCTGCCACTCTTCGTCTCTTCTTCCACGATTGCTTTGTTCAGGGTTGTGATGGTTCTGTTCTCGTGTCATCTACCCCACATAACAGAGCAGAGAGGGATCATCCTGATAATCTTTCGTTAGCTGGAGATGGATTTGATACGGTTATCAAAGCCAAAGAAGCTGTGGATGCTGTTCCTTTATGCAGGAATAAAGTTTCATGTGCTGATATTTTAGCTATGGCAACCCGTGATGTTGTTACATTGGCAGGTGGACCTTATTATGAGGTTGAATTGGGGAGATTTGATGGGCTAAGATCTAAAGATTCAGATGTAAATGGGAGGCTTCCTGAGCCAGGATTTAACTTAAATCAGCTTAATTCACTTTTTGCAAGAAATGGGCTTACACAAACAGAAATGATTGCACTTTCAGGTGCACACACTGTTGGTTTCTCACATTGCAACAAATTCTCCAACAGAGTATACAATTTCAACTCAAAATCTCGAGTAGACCCTACACTAGACCTACACTACGCAACAACACTAAAATCAATGTGTCCAAGAAACGTTGATCCAAGGGTTGCAATTGACATGGATCCAATAACTCCACATGCTTTTGATAATGTTTACTTCAAGAATCTTCAAAAGGGAAAGGGGTTGTTTACTTCAGATCAAGTTCTGTTCACGGATTCAAGGTCTAAGAATGCAGTGAATGCTTTTGCTAGTAGTAATAAAATATTTCGTGCTAACTTTGTTGCTGCTATGACTAAGTTGGGGAGAGTTGGTGTTAAGAATTCGCAGAATGGGAATATTCGTACGGATTGTTCGGTGATTTGA 987 0.3931 MSQLNLLLIWLLFLTLCLHSCPTYAQLSRHHYKNSCPNVESIVREAVKKKFHQTFTTIPATLRLFFHDCFVQGCDGSVLVSSTPHNRAERDHPDNLSLAGDGFDTVIKAKEAVDAVPLCRNKVSCADILAMATRDVVTLAGGPYYEVELGRFDGLRSKDSDVNGRLPEPGFNLNQLNSLFARNGLTQTEMIALSGAHTVGFSHCNKFSNRVYNFNSKSRVDPTLDLHYATTLKSMCPRNVDPRVAIDMDPITPHAFDNVYFKNLQKGKGLFTSDQVLFTDSRSKNAVNAFASSNKIFRANFVAAMTKLGRVGVKNSQNGNIRTDCSVI 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g07387 328 Pfam Peroxidase 43 293 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa1g07387 328 ProSiteProfiles Plant heme peroxidase family profile. 26 328 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa1g07387 328 Gene3D - 31 328 - -
Vifa1g07387 328 PANTHER - 8 327 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa1g07387 328 Gene3D Peroxidase, domain 2 167 308 - -
Vifa1g07387 328 PRINTS Plant peroxidase signature 122 132 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa1g07387 328 PRINTS Plant peroxidase signature 188 200 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa1g07387 328 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa1g07387 328 PRINTS Plant peroxidase signature 303 316 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa1g07387 328 PRINTS Plant peroxidase signature 263 280 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa1g07387 328 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa1g07387 328 PRINTS Plant peroxidase signature 141 156 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa1g07387 328 PRINTS Plant peroxidase signature 247 262 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa1g07387 328 PRINTS Plant peroxidase signature 101 114 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa1g07387 328 FunFam Peroxidase 30 177 - -
Vifa1g07387 328 ProSitePatterns Peroxidases proximal heme-ligand signature. 189 199 IPR019793 -
Vifa1g07387 328 CDD secretory_peroxidase 26 328 IPR033905 GO:0004601|GO:0042744
Vifa1g07387 328 FunFam Peroxidase 167 308 - -
Vifa1g07387 328 SUPERFAMILY Heme-dependent peroxidases 26 327 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vifa1g07387 328 PRINTS Haem peroxidase superfamily signature 189 204 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa1g07387 328 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa1g07387 328 PRINTS Haem peroxidase superfamily signature 249 264 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa1g07387 328 PRINTS Haem peroxidase superfamily signature 123 140 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa1g07387 328 PRINTS Haem peroxidase superfamily signature 141 153 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g07387 Vifa-Chr1 1137337611 1137339385 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g07387 1 325 Peroxidase AT3G49960 64.000 8.20e-157 440
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g07387 K00430 - gmx:100804350 575.474
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g07387 1 1137337611 1137339385 Vifa4g04469 4 1411404601 1411405964 PCT
Vifa4g02711 4 838133757 838136088 Vifa1g07387 1 1137337611 1137339385 PCT