Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g07364 ATGCCAACAAGCTTCAACCACCATTCAATCTGGTACAAATCCATTCTAAAGTCGGTATCCGAGTCAGCTGAAGTACTCTATACTTATGATAAGGCAATAAATGGATTCTCCACAAGTTTGACTCTTGAAGAACATCAGTTACTAAAGAGCCAACCCGGGATTCTAAAGGTGACACCTGATGAAATGTACAAACTTCACACAACTCGAACACCAGAGTTTCTCGGGCTTGATAAATTTGCTAGTTTGTTCCCCGCGGCAAACAAAAGTAGTGATGTAATTGTGGGAGTCCTAGACACAGGTGTATGGCCCGAAAGCAAGAGCTTCGATGATACAGGATTCGGGCCAATCCCGCGCATTTGGAAAGGAAAATGTGAAACAGCTGCGGGTCCTATTGATGAAACCATTCAGTCAAGATCGCCTCGAGACGATATAGGCCATGGAACCCACACCGCGAGCACAGCTGCAGGATCTGTGGTGGAAAACGTAGGTCTTTTTGGCTATGCCAATGGAACTGCACGTGGGATGGCAATCGGCGCTAGAGTTGCTGTTTATAAGGTTTGTTGGAAAGGTTTATGCAGCACTTCAGATGTATTGGCTGGAATAGATCAGGCCATTGCTGACAACGTCAATATTCTTTCATTGTCGCTTGGAGGAAATTCTGGTCCTACTCCTTCCAGTGTCACTAATGTAGCACCCTGGATTACCACTGTGGGAGCTGGAACACTCGATCGAGATTTCCCTGCATTCGTCAGTTTAGGAAATGGAAAAAACTATTCAGGTGTATCCCTTTATAATGGCAATTCTTTTCCCGACACTCTTGTACCGTTTATATATGCAGGAAATGCAAGCAGTCATGAAGGAAAAGGTGATGGAACATGTGTTCTAGGTAGTTTGGATCCCAAAAAAGTAGTGGGAAAGATTGTGTTGTGTGACCGCGGAAATATTGACAGGGTGGAGAAAGGAAATATAGTGAAATCTGTTGGTGGTTTGGGCATGGTGTTAGCCAACACTGAGAAGGATGGAGAAATACCACGAGCAGAAGCCCATATTTTGCCAGCAACTGCCGTTAGCTTCACAGATGGTGAAGCTATCAAGAATTACTTGTTTTCCAATCCAAAGTCGACGGGCACAATTGTGTTTCAAGGAACAAAGCTAAAGGTTGAGCCATCTCCTGTTGTTGCAGATTTCAGCTCACGAGGACCCAATTCAATAACCCCTCAAATACTGAAACCTGATCTCATTGCTCCTGGTGTTAACATCTTAGCAGCTTATTCAAAAAATGCTAGTCCCACAAGCTGGTATTTTGATTCTAGACGCGTAGATTTCAACATTCTCTTAGGCACATCAATGTCATGCCCACACGTAAGTGGAATAGCAGCTCTAATCAAGTCAATTCATCCAGATTGGAGCCCAGCCGTCATTCGTTCCGCGCTGATGACAACCGCTTACACAACTTACAAAAACAATCATACATTATTGGACATTTCAACCAACAAGCCAGCAACTCCATTTGAGTTTGGTGCTGGACATGTTGACCCTGTTTCCGCTCTTAATCCCGGACTTGTCTATGATTTAACAACGGAAGACTATTTGAGCTTCCTTTGTGCATTGAACTACTCACATGTTGATTTCGAAATTGTGGCGAGGAGAAAGTACACTTGCGATCCAAATAAACAATACAGTGTAACAAACCTTAATTACCCTTCTTTTGCTGTGGTCTTTAAAGGTGGGAATAATGAGATTAAACACAGCCGGACTCTTACCAATGTGGGTGCGGCAGGAACATACAAGGTATCAGTTAAGTCAGATGTTTCATCCGTCAAGATCTCGGTTGAACCAGAAGTGTTAAGTTTTAAGGAAAATGAGAAAAAATCATACATAGTTACATTTACTACATCAACTTTGAAACAAAATATTACTCAAAGGTTTGGAAGTTTGGCATGGTCAGATGGAAGAACTGTTGTTAGAAGTCCTATAGCATTTAGTTGGAAATTACAGTAA 2001 0.4253 MPTSFNHHSIWYKSILKSVSESAEVLYTYDKAINGFSTSLTLEEHQLLKSQPGILKVTPDEMYKLHTTRTPEFLGLDKFASLFPAANKSSDVIVGVLDTGVWPESKSFDDTGFGPIPRIWKGKCETAAGPIDETIQSRSPRDDIGHGTHTASTAAGSVVENVGLFGYANGTARGMAIGARVAVYKVCWKGLCSTSDVLAGIDQAIADNVNILSLSLGGNSGPTPSSVTNVAPWITTVGAGTLDRDFPAFVSLGNGKNYSGVSLYNGNSFPDTLVPFIYAGNASSHEGKGDGTCVLGSLDPKKVVGKIVLCDRGNIDRVEKGNIVKSVGGLGMVLANTEKDGEIPRAEAHILPATAVSFTDGEAIKNYLFSNPKSTGTIVFQGTKLKVEPSPVVADFSSRGPNSITPQILKPDLIAPGVNILAAYSKNASPTSWYFDSRRVDFNILLGTSMSCPHVSGIAALIKSIHPDWSPAVIRSALMTTAYTTYKNNHTLLDISTNKPATPFEFGAGHVDPVSALNPGLVYDLTTEDYLSFLCALNYSHVDFEIVARRKYTCDPNKQYSVTNLNYPSFAVVFKGGNNEIKHSRTLTNVGAAGTYKVSVKSDVSSVKISVEPEVLSFKENEKKSYIVTFTTSTLKQNITQRFGSLAWSDGRTVVRSPIAFSWKLQ 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g07364 666 PRINTS Subtilisin serine protease family (S8) signature 446 462 IPR015500 -
Vifa1g07364 666 PRINTS Subtilisin serine protease family (S8) signature 89 108 IPR015500 -
Vifa1g07364 666 PRINTS Subtilisin serine protease family (S8) signature 142 155 IPR015500 -
Vifa1g07364 666 Gene3D Peptidase S8/S53 domain 218 530 IPR036852 GO:0004252|GO:0006508
Vifa1g07364 666 FunFam subtilisin-like protease SBT1.5 243 385 - -
Vifa1g07364 666 Pfam Fibronectin type-III domain 564 660 IPR041469 -
Vifa1g07364 666 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 2 66 IPR037045 -
Vifa1g07364 666 Gene3D - 534 663 - -
Vifa1g07364 666 Pfam PA domain 292 364 IPR003137 -
Vifa1g07364 666 Gene3D - 243 386 - -
Vifa1g07364 666 Gene3D Peptidase S8/S53 domain 91 217 IPR036852 GO:0004252|GO:0006508
Vifa1g07364 666 ProSitePatterns Serine proteases, subtilase family, serine active site. 447 457 IPR023828 -
Vifa1g07364 666 CDD Peptidases_S8_3 63 483 IPR034197 -
Vifa1g07364 666 CDD PA_subtilisin_like 250 378 - -
Vifa1g07364 666 Pfam Peptidase inhibitor I9 4 66 IPR010259 -
Vifa1g07364 666 SUPERFAMILY Subtilisin-like 65 521 IPR036852 GO:0004252|GO:0006508
Vifa1g07364 666 Pfam Subtilase family 89 509 IPR000209 GO:0006508|GO:0008236
Vifa1g07364 666 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 22 660 IPR045051 -
Vifa1g07364 666 ProSiteProfiles Serine proteases, subtilase domain profile. 73 517 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g07364 Vifa-Chr1 1134759056 1134761214 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g07364 1 663 Subtilisin-like Serine Gene Family AT5G67360 60.223 0.0 849
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g07364 - - gmx:100815413 888.641