Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g07349 ATGAAGAAACCTCTAGTTATAACTATTTTTACGATTATGCTTGTCTGTGGTGTGTGTATGACTTGTGAGGAGAAGACTAGTTATATTGTTCATATGGCTAAATCTCAAATGCCATCCATCTTCACACATGACTCATATTGGTATGAGTCAACTCTTAAGTCAGTCTCTCCTTCAGCCCAAATTCTCTACCACTATAACAAAGCAATTCATGGGTTTTCCACCAGTTTAACCGCTAGAGAAATGCAGCTGTTGTCAAACCAATTTGGAATTTTAAGAGTTTTACCGGATAAAAAGTATCAACTTTTTACAACTAGGACTCCAGAGTTTCTTGGCGTTGATAGAATTCCTTCCATGTTCCCTGCATCATCTACAAACATGGGGAACATAATTGTTGGTGTTATAGACACTGGCGTTTGGCCTGAAAGCAAGAGTTTTGATGATATTGGATACGGGCCCATTCCCAGCACATGGAAAGGAAAATGTGAAATAGGTACAAATTTCACATTCTCAAACTGCAACAAGAAATTGATAGGTGCCCGGTTCTATCTTAAGGGCTTTGAGGCATACGAGGGTCGTCCGATCAATGAAACCAAGGATACTAGGTCTCCCCGAGACAATTATGGACATGGAACCCACACAGCTAGCACGGCTGTAGGGTCTCCAGTGAGAAATGCAAGTCTTTTCGGCTACGCTAATGGTACAGCTCGTGGGATGGCCCCGGGGGCCAGAGTTGCTATATACAAGGTTGGCTGGGAACGTGGTACTATGATGGACTCTGATTTTATCGCCGCAATTGATCAAGCTATTGCTGACAACGTCAATGTCCTTTCATTGTCGATCGGAGATAGAGCACTTGATTATTATGAGGACAGCCTTGCAATTGGAGCATTTGCAGCAATGGAGCATGGGATTATGGTATCTTGTGCCGGAGGAAACTTTGGTCCCTATTCTTCACGTATCACCAATGTAGCACCTTGGATTACCACAGTGGGAGCTGGCACAATCGACCGAGATTTCCCTGCATATGTCACTCTCGGAAACAATCAAAGTTATACCGGAGTGTCCCTTTACAATGGAAGTTCTTTACCCGATACTCCAATATCGTTTATATATGGCGGGAATGCAAGCAATCCCGATTATGCCGGAGAAGGGATAGCCAGTGAGTGTGATCCGGGTAGCTTGGCCAAAGAAAAAGTAACTGGAAAGATCGTGATGTGTGATTTTGGGTTTGGATTTGGATTTGTTACCCCGCTGGAAAAAGGAAAAGTAGTCAAATCAGTTGGTGGTTTGGGCATGGTGTTAGCCAACTCTGTTGACTATGGAGAGGAGTTGATGGCAGATCCCCATGTTTTGCCAACAATAGTTGTCAAGTTCAAAGATGGTGAAGCCATAAAAAAATATTTGTTTTCTTCAGATCCTAACAAATCAATGGCTAAAATTGTTTTTGAAAGAACAAAGTTTGGGGTTGAGGTGTCTCCCGTTGTTGCAAGCTTTAGCGGACGAGGCCCCAATTCAATAACCCCTCAAATATTAAAGCCCGATTTCATTGCTCCAGGTGTTAACATCTTAGCAGCATTTACTAGAAATGATAGTCCCGCTAATGACGCTTGGGATTCTAGGCGGGTGGATTTTAACATTGAGTCAGGCACGTCCATGGCATGCCCTCATGTAAGCGGGATAGCAGCTTTAATCATGTCGATTCATCCAGATTGGAGCCCAGCTTCCATTCGATCTGCACTAATGACGACTGCTTATCCGGTTTACAAGAATGGAAAAACATTGTTGGATGGCTTTAACAAAAAGCATGCGACACCCTTTGACTTTGGGGCTGGACACGTCGATCCTGTTCTTGCACTACGTCCCGGACTTGTCTATGATCTGACAGTTGATGATTACTTGAGCTTCCTCTGTGCATTGAACTACTCAGCTGCAGATATTGAAATCGTGGTGAAAAGAAAGTATAAATGTCACGCAAAGAAGCAGTACAGTATAACAAACCTCAATTACCCTTCGTTTGCTGTGGTCTTTGAAGAAACCATGGAGGTTAAACACAGGCGTACTCTCACAAATGTGGGTGCGGCGGGAACTTACAAAGTATCGTTTAAATCAAACATGTCTTTGGTGAATATCACAGTTGAACCACAAGTGCTAAGGTTCAAAAAGGATGAGAAAAAGTCGTATGTTGTTACATTCACAAGTACTAGAACAAGTTCAGAAAGAGATAGTTTTGGAAGCTTAGAATGGTCAAATGAAAATACTATTGTGAGAAGTCCGATAACATTCAGTTGGAAAAAGCCTAAAAAAGCTTGA 2310 0.4247 MKKPLVITIFTIMLVCGVCMTCEEKTSYIVHMAKSQMPSIFTHDSYWYESTLKSVSPSAQILYHYNKAIHGFSTSLTAREMQLLSNQFGILRVLPDKKYQLFTTRTPEFLGVDRIPSMFPASSTNMGNIIVGVIDTGVWPESKSFDDIGYGPIPSTWKGKCEIGTNFTFSNCNKKLIGARFYLKGFEAYEGRPINETKDTRSPRDNYGHGTHTASTAVGSPVRNASLFGYANGTARGMAPGARVAIYKVGWERGTMMDSDFIAAIDQAIADNVNVLSLSIGDRALDYYEDSLAIGAFAAMEHGIMVSCAGGNFGPYSSRITNVAPWITTVGAGTIDRDFPAYVTLGNNQSYTGVSLYNGSSLPDTPISFIYGGNASNPDYAGEGIASECDPGSLAKEKVTGKIVMCDFGFGFGFVTPLEKGKVVKSVGGLGMVLANSVDYGEELMADPHVLPTIVVKFKDGEAIKKYLFSSDPNKSMAKIVFERTKFGVEVSPVVASFSGRGPNSITPQILKPDFIAPGVNILAAFTRNDSPANDAWDSRRVDFNIESGTSMACPHVSGIAALIMSIHPDWSPASIRSALMTTAYPVYKNGKTLLDGFNKKHATPFDFGAGHVDPVLALRPGLVYDLTVDDYLSFLCALNYSAADIEIVVKRKYKCHAKKQYSITNLNYPSFAVVFEETMEVKHRRTLTNVGAAGTYKVSFKSNMSLVNITVEPQVLRFKKDEKKSYVVTFTSTRTSSERDSFGSLEWSNENTIVRSPITFSWKKPKKA 769
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g07349 769 SUPERFAMILY Subtilisin-like 101 623 IPR036852 GO:0004252|GO:0006508
Vifa1g07349 769 FunFam Subtilisin-like protease SBT1.9 17 102 - -
Vifa1g07349 769 Pfam Peptidase inhibitor I9 27 101 IPR010259 -
Vifa1g07349 769 CDD PA_subtilisin_like 342 480 - -
Vifa1g07349 769 PRINTS Subtilisin serine protease family (S8) signature 205 218 IPR015500 -
Vifa1g07349 769 PRINTS Subtilisin serine protease family (S8) signature 126 145 IPR015500 -
Vifa1g07349 769 PRINTS Subtilisin serine protease family (S8) signature 548 564 IPR015500 -
Vifa1g07349 769 MobiDBLite consensus disorder prediction 194 216 - -
Vifa1g07349 769 CDD Peptidases_S8_3 99 585 IPR034197 -
Vifa1g07349 769 ProSiteProfiles Serine proteases, subtilase domain profile. 109 619 - -
Vifa1g07349 769 Pfam PA domain 380 464 IPR003137 -
Vifa1g07349 769 Pfam Fibronectin type-III domain 666 760 IPR041469 -
Vifa1g07349 769 Gene3D - 336 487 - -
Vifa1g07349 769 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 28 759 IPR045051 -
Vifa1g07349 769 ProSitePatterns Serine proteases, subtilase family, serine active site. 549 559 IPR023828 -
Vifa1g07349 769 Gene3D Peptidase S8/S53 domain 128 632 IPR036852 GO:0004252|GO:0006508
Vifa1g07349 769 FunFam subtilisin-like protease SBT1.5 336 487 - -
Vifa1g07349 769 Pfam Subtilase family 128 610 IPR000209 GO:0006508|GO:0008236
Vifa1g07349 769 FunFam Subtilisin-like protease SBT1.5 128 350 - -
Vifa1g07349 769 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 19 102 IPR037045 -
Vifa1g07349 769 Gene3D - 636 763 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g07349 Vifa-Chr1 1133312748 1133315057 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g07349 5 763 Subtilisin-like Serine Gene Family AT5G67360 58.170 0.0 860
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g07349 - - gmx:100815413 914.45