LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vifa1g07320	ATGGATCCTAATCATTTTCATTATCAACAAACTATGTTCAATTACATGCAAAATAATCAAAATCCTAATTCTCAAAATGCTCAAATTCCATCGGTGTCAACAAACCCCGCCATATTTTTTCCGTCACCAAACAATCCAAATATGTTTCCTAGCCCTCAAATGAATTCTAATAGTATGGAATTTTTTTGTCATGAACCAGAAATACCGATTGGATTTATCTGGGATGAGGATATACTTCTTATCCAATCATGGCTCAATGTTTCAAAGGATCCAATTGTGGGAGTTGATCAAAAGGCTGAGAGTTTTTGGGTAAGAGTCGCTGCCAATTATAACCAGTACCGTGGACAATCGCGGGAAAAGGTAGGGGGACAATTAAAATGTCGATGGCATCGAATAAATGCCATGGTTCAAAAATTTGTTGGGTGTTACAAACAAGCTGTTAATGGAAAGAAAAGTGGGACATCGGAGAACGATATCATGGCCTCTGCACATGCTTTTTTTGCTCAGGATCAAGGTACAACATTCAATCTTGAGTACACATGGCGACTGTTAAAAGATGAATCTAAATGGATGGGAGAATCGATTGGAAGTTCTTCAAAAATAACAAAGACTTCCGCTAGTGGGGCATCATCGGAGAACCCAGATACACATTCAAGTTATGAGTTTGACTCATCATCACCAATGGAGCGTCCAATGGGACAAAAAGCAGCAAAAAGGAAGGGTAAGACAAATAATATTCCAACTACAACGGAAGATGCAAGGAATAAAAGAACAACGACAATGAAAAGACTAGTGCAATGTAAGGAGGACGAGATAGAAGTAAAGGTAATGCCAATCATGATGAAAGACACTTGTACTATGAGCGATAGTCAACGAGATATTCATGAAAAATATTGTAATAAGATGAAAAAAAATATGGAATGTAGTTAG	930	0.3742	MDPNHFHYQQTMFNYMQNNQNPNSQNAQIPSVSTNPAIFFPSPNNPNMFPSPQMNSNSMEFFCHEPEIPIGFIWDEDILLIQSWLNVSKDPIVGVDQKAESFWVRVAANYNQYRGQSREKVGGQLKCRWHRINAMVQKFVGCYKQAVNGKKSGTSENDIMASAHAFFAQDQGTTFNLEYTWRLLKDESKWMGESIGSSSKITKTSASGASSENPDTHSSYEFDSSSPMERPMGQKAAKRKGKTNNIPTTTEDARNKRTTTMKRLVQCKEDEIEVKVMPIMMKDTCTMSDSQRDIHEKYCNKMKKNMECS	309

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vifa1g07320	309	Pfam	No apical meristem-associated C-terminal domain	174	293	IPR029466	-
	Vifa1g07320	309	PANTHER	-	39	304	-	-
	Vifa1g07320	309	MobiDBLite	consensus disorder prediction	194	253	-	-
	Vifa1g07320	309	MobiDBLite	consensus disorder prediction	194	225	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vifa1g07320	Vifa-Chr1	1126472194	1126473213	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vifa1g07320	76	284	Glutathione S-transferase Gene Family	AT5G41240	32.579	8.77e-27	108

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vifa1g07320	-		-	psat:127115199	419.083