Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g07238 ATGTTGAAGTTCAATCCATGCAGCAACAGAACCCTAATCTATCTCAGATCCTTAACTTCCCCACAACCATCACCATTCTCCCTGCATTTCTCCACCAACACTTCCGATTCAACCCCATTCGAAGTTTCCTACCTCATCCACAATTTCGATTTCTACCCACAATCTGCTTCCAAACTCTGCTCCACCTACCGTCTCGGTTTCAAAACCACCCAAAACCCTGACTCCGTTCTCAACTTCTTCAGAAACCACAATTTCTCTAATTCCCAATTACGCAACATGATTGCCAAGGCACCGTGGCTACTTTCCTGCAACCTCTCCAAAAGGTTATCGCCAAAGTTTGAATTTTTTCTCTCCAAAGCTCACAATCCGTCTTTCTTTGGAGACAGCAATGTGCCACAAAATATCAGAATGCTCATTGAGAATGGAGTAGCTGATGCAAACATTGCGAGAATTCTTCGGATCAGGACTCGGACATTCCAGGTGCGTGACATGGTGAGTTTATTGGAGGAATTAAAGGGTTTGGGGTTTAATCCTTCGAAAACAACTTTTGGTGTAGCTATGATTGCGAAAACATCGGTAACCAAAACCACGTGGAAGGAGAAAGTTGATGCCTTTAACAATTTGGGTTGGTCTCATGAAAATGTCATTCAAGCATTTAAAAGGCAACCTCCTGTATACTTCCATCCGTAA 690 0.4304 MLKFNPCSNRTLIYLRSLTSPQPSPFSLHFSTNTSDSTPFEVSYLIHNFDFYPQSASKLCSTYRLGFKTTQNPDSVLNFFRNHNFSNSQLRNMIAKAPWLLSCNLSKRLSPKFEFFLSKAHNPSFFGDSNVPQNIRMLIENGVADANIARILRIRTRTFQVRDMVSLLEELKGLGFNPSKTTFGVAMIAKTSVTKTTWKEKVDAFNNLGWSHENVIQAFKRQPPVYFHP 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g07238 229 Gene3D Transcription termination factor 3, mitochondrial 53 229 IPR038538 -
Vifa1g07238 229 PANTHER CGI-12 PROTEIN-RELATED 40 118 IPR003690 GO:0003690|GO:0006355
Vifa1g07238 229 Pfam mTERF 71 224 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g07238 Vifa-Chr1 1119225440 1119226129 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Vifa1g07238 mTERF 2.9e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g07238 K15032 - mtr:25488156 258.455