Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g07231 ATGGATGATCCTACAGTGAAGTGGTCAAAAGAAAGGTATGATGAAATTGAGTCGAAGATGATACCATTTCTTAAGCAATCGGGTTACAATTTGAAGAAAGATGTCTTGTTTTTACCTATATCTGGGCTGATCGGTACAAACCTAAAAACAAGAATGGGTAAAAGCATTTGTCCATGGTGGGATGGTCCTTGCCTATTTGAAGCTCTTGACGCCATTGAAGTTCCTCTAGGAGATCCTAACGATCCTTTCAGGATGCCTGTACTCGACAAATTCAAAGACATGGAAACTGTTGTTATGGGCAAAGTGGAATCTGGTAGTATTCGTGAGGGAGATTCCTTGTTGATTATGCCAAATAAGGATCAAGTGAAAGTTGTTGCTATATTTATTGATGAGAATCGAGTTAAACGTGCTGGACCCGGTGAAAATTTACGGGTTAGAGTATCTAGTGTTGAAGAAGAGAACATATCATTGGGATTTGTCCTGTCTAGTACTGGTAAGCTTTTGCTGTACTAA 513 0.3938 MDDPTVKWSKERYDEIESKMIPFLKQSGYNLKKDVLFLPISGLIGTNLKTRMGKSICPWWDGPCLFEALDAIEVPLGDPNDPFRMPVLDKFKDMETVVMGKVESGSIREGDSLLIMPNKDQVKVVAIFIDENRVKRAGPGENLRVRVSSVEEENISLGFVLSSTGKLLLY 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g07231 170 PANTHER TRANSLATION FACTOR 1 163 - -
Vifa1g07231 170 SUPERFAMILY Translation proteins 75 166 IPR009000 -
Vifa1g07231 170 CDD eRF3_II 82 163 - -
Vifa1g07231 170 Gene3D Translation factors 80 164 - -
Vifa1g07231 170 FunFam Translation elongation factor EF-1 79 166 - -
Vifa1g07231 170 Gene3D - 1 75 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g07231 Vifa-Chr1 1116348242 1116364632 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g07231 1 164 Eukaryotic Initiation Factors Gene Family AT5G60390 35.542 4.96e-24 95.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g07231 K03267 - gmx:100784412 291.967
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g07231 1 1116348242 1116364632 Vifa1g07231 1 1116348242 1116364632 ECH