Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g07227 ATGGGAGAAGTGAAGCTAATTGCATCTCCTCAAAGCTTCCCTTGTGCAAGAATTGAATGGGCTTTAAAGTTAAAAGGTGTTGAATATGAATACATGCAAGAAGATCTATTAAACAAGAGTCCTTTACTTCTTCAATCCAATCCTGTCCACAAGAAAGTTCCAGTGCTACTTCATGATGGAAAATCAATTCCTGAATCACTTGTCATCCTTGAGTACATAGATGAGACATGGAAGAACAACCCTTTGCTACCACAAGATCCATATGAGAGATCATTAGCTCGTTTTTGGGCAAAGTTTATTGATGAGAAGTGTTTGGCTGGTGTATGGGGAGCCTGTGTGGCCCAAGGAGATGAAAAGGCAAAAGCTGTTGATGCTGCAAAGGAGTTACTATCATTTCTTGAGAAGCATATTGAAGGGAAAAAGTATTTTGGTGGAGACAAGATAGGGTATCTTGATATTGTAGCTGGATGGATATCATATTGGCTTAATGTTCTTGAGGAGCTTGGAGAAGTTGAACTAGTCAATGCTGAAAGTTTTCCTTCTCTTTATGAGTGGGGGCATAGCTTCATCGAAACTTCACCTATCAAATATTGTGTTCCACCAAGGGAAATGGTGGTTGAATATTTTAGCTTTGGTATTAACTATGTTCGTTCCTTGGCATCTACGGAATAG 672 0.3929 MGEVKLIASPQSFPCARIEWALKLKGVEYEYMQEDLLNKSPLLLQSNPVHKKVPVLLHDGKSIPESLVILEYIDETWKNNPLLPQDPYERSLARFWAKFIDEKCLAGVWGACVAQGDEKAKAVDAAKELLSFLEKHIEGKKYFGGDKIGYLDIVAGWISYWLNVLEELGEVELVNAESFPSLYEWGHSFIETSPIKYCVPPREMVVEYFSFGINYVRSLASTE 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g07227 223 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 12 206 IPR045073 -
Vifa1g07227 223 SFLD Main (cytGST) 1 210 - -
Vifa1g07227 223 CDD GST_N_Tau 4 77 - -
Vifa1g07227 223 Gene3D - 83 217 - -
Vifa1g07227 223 Pfam Glutathione S-transferase, C-terminal domain 117 187 IPR004046 -
Vifa1g07227 223 SFLD Main.3: Omega- and Tau-like 1 210 IPR045073 -
Vifa1g07227 223 FunFam Tau class glutathione S-transferase 83 218 - -
Vifa1g07227 223 SUPERFAMILY GST C-terminal domain-like 75 211 IPR036282 -
Vifa1g07227 223 Gene3D Glutaredoxin 1 82 - -
Vifa1g07227 223 FunFam Tau class glutathione S-transferase 1 85 - -
Vifa1g07227 223 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 86 208 IPR010987 -
Vifa1g07227 223 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 2 81 IPR004045 -
Vifa1g07227 223 CDD GST_C_Tau 87 211 IPR045074 GO:0004364|GO:0006749
Vifa1g07227 223 SUPERFAMILY Thioredoxin-like 4 104 IPR036249 -
Vifa1g07227 223 Pfam Glutathione S-transferase, N-terminal domain 15 75 IPR004045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g07227 Vifa-Chr1 1116249450 1116250278 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g07227 3 209 Glutathione S-transferase Gene Family AT2G29420 49.275 6.56e-72 216
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g07227 K00799 - gmx:547587 338.191