Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g07222 ATGGCGTCCAAGTCTCCGCCTCCGCCTTCCCGGACTTCCTCTTCTAGATCCGAGCCTCCTCTCGATCCTTCCACATCGAAAATGGTGGATACCGGTCCTGCAGTTAAAGAGGTGTTATCGGTTATTGAATCTTTGAAGAAACAAGTTGCTGCGAAACGGATTGTTTCGGTCAAGAATAGAGTGGAGGAGAATAGACAGAAGCTGGCTGGTATTACTAACCAGCTCTGGAAATCGGCAGCGGAGAGAAAGACGTGTGACGTTGCGGATAATGATAAAAATCTGGATCTGTTGACTAAAAGGCAACAAGAAGCGATTGATATGCATAATGGTGTTTGTGCTGGTAATGATGATGGCGAGAGTAATGGTAATCATGGAGATGACCATGGATCTACGGCAGTTCTTCTAGGATCTAATGTTGCTGTAAAGAATGCTGTTCGGCCTATCAAATTACCGGAAGTAAGAAGATTGCCTCCTTACACTACATGGATTTTTCTGGACAGAAATCAAAGAATGACAGAGGATCAATCGGTTTTAGGTCGGAGGCGAATTTATTATGATCAAAATGGTGGTGAAGCACTTATTTGCAGTGACAGTGAGGAGGAACTCGTTGATGAAGAAGAGGAAAAAAGAGAATTTGTAGAACCAGAAGATTTTATACTTCGCATGACTGTCAGAGAATTTGGTTTATCTGAGGCTGTTTTGGAGTCACTGGCTCAGTGTTTTTCTAGAAAAACTAGCGACATTAAGGCCAGATATGAAACTTTTTGCAATGAAGACAATGCTGCCGGGGATTCTAAAAATGGAGATGCACAAGATAATTCTCAAAGTGACAATTCTTTTCTAGAAAAGGATCTTGAAGCAGCTCTTGACTCTTTTGACAACCTCTTTTGCCGCCGATGTCGTGTTTTTGATTGCAGATTACATGGATGCTCCCAGGATCTTGTATTTCCGGCTGAGAGGCAACCTCCGTGGAGTCCTCCTAATACTGAAAATGCACCATGTGGGCCGAATTGTTTCAGATCGGTACTTAAGGCAGAAAAAATGCCGAAAGTCACATCTTCTACTCAGACTGATGTTGAAGACAAATCCTCTGGCAGTGTTCTATCTAGGAAAAAGTCTTCTGGTAGAAGGCGAATAAAATGCAGCCAAAGTGAAAGTGCTTCATCTAATGCTAAGAACATATCTGAGAGTAGTGACTCTGAGAATGGTCCTGGACGGGATGCTATTTCAGCTTCCCACTCAGCTCCACCTAAAGCTAAGCCAGTAGGGAAAAGTGGAAAAGGTAAGAGAAACAGTAAACGAGTGGCAGAACGCGTTCTAGTTTGCATGCAGAAACGGCATAAGAAAACAGTAGCTTCTGATTCTGATTCCATTAGTGAAGCTCCTGATCGCCCATTGAATGATTTGGTTTCTGAACCACATGTCATGAGTGGGGAAGACAACACAAGGAAAGAAGAGTTTGTAGATGAAAACATTTCTAAACAAGAAATGACAGATAATAAATCTTGGAAACCTCTTGAAAAAGGGCTTTTAGAAAAAGGAATGGAGATTTTTGGCAAAAACAGCTGCTTAATAGCCAGGAATCTCTTTAATGGTCTAAAGACATGTTGGGATGTTTTCCGGTACATAAATTGTGAAGAAGGGAAGTTGTCTGGTTCTACTGGGGATACCGTGAATTCTCTTGTGGAAGGCTATTCCAAGGGTAATAATGATGTGAGAAGAAGATCAAAATTTTTACGTAGAAGAGGAAAAGTCCGTCGTTTAAAGTATACCTGGAAATCCGCTGCTTATCATTCAATCAGGAAAAGGATTACAGAGAGAAAGGATCAGCCCTGCCGACAGTACAACCCATGTGGATGCCAATCAGCTTGTGGAAAGGAGTGTCCTTGTCTTCAAAATGGAACCTGCTGTGAGAAGTACTGTGGATGTCCCAAGAGTTGTAAAAACCGATTTCGTGGCTGTCATTGTGCAAAGAGTCAATGCCGAAGTCGTCAATGTCCATGCTTTGCTGCAGATAGGGAATGTGATCCGGACGTTTGTAGGAACTGTTGGGTCAGCTGTGGCGATGGCACTCTTGGGATTCCTAGTCAAAGAGGGGATAATTATGAATGTAGAAACATGAAGCTTCTTCTCAAACAGCAGCAAAAGGTTCTTCTTGGACGGTCTGATGTGTCTGGCTGGGGAGCATTCTTAAAGAATAGCGTTGGTAAGCATGAATACCTCGGAGAGTACACTGGAGAGTTAATTTCTCATAGGGAAGCAGATAAGCGAGGAAAGATATATGACCGTGAAAATTCATCTTTTCTCTTTAATCTGAATGATCAGTTTGTTCTTGATGCATATCGAAAGGGTGATAAATTAAAGTTCGCTAACCACTCGCCTGTTCCAAATTGTTACGCAAAGGTTATTATGGTTGCTGGAGATCATAGGGTAGGAATATTTGCCAAAGAGCGGATTAATGCTGGGGAGGAGCTGTTTTATGATTACCGTTATGAACCCGATAGAGCTCCGGTTTGGGCTCGGAAACCAGAGGCACCTGGATCGAAGAAAGAAGATGGCGCTCCTTCAAGTGGTCGGGCAAAGAAGCTTGCTTAA 2595 0.427 MASKSPPPPSRTSSSRSEPPLDPSTSKMVDTGPAVKEVLSVIESLKKQVAAKRIVSVKNRVEENRQKLAGITNQLWKSAAERKTCDVADNDKNLDLLTKRQQEAIDMHNGVCAGNDDGESNGNHGDDHGSTAVLLGSNVAVKNAVRPIKLPEVRRLPPYTTWIFLDRNQRMTEDQSVLGRRRIYYDQNGGEALICSDSEEELVDEEEEKREFVEPEDFILRMTVREFGLSEAVLESLAQCFSRKTSDIKARYETFCNEDNAAGDSKNGDAQDNSQSDNSFLEKDLEAALDSFDNLFCRRCRVFDCRLHGCSQDLVFPAERQPPWSPPNTENAPCGPNCFRSVLKAEKMPKVTSSTQTDVEDKSSGSVLSRKKSSGRRRIKCSQSESASSNAKNISESSDSENGPGRDAISASHSAPPKAKPVGKSGKGKRNSKRVAERVLVCMQKRHKKTVASDSDSISEAPDRPLNDLVSEPHVMSGEDNTRKEEFVDENISKQEMTDNKSWKPLEKGLLEKGMEIFGKNSCLIARNLFNGLKTCWDVFRYINCEEGKLSGSTGDTVNSLVEGYSKGNNDVRRRSKFLRRRGKVRRLKYTWKSAAYHSIRKRITERKDQPCRQYNPCGCQSACGKECPCLQNGTCCEKYCGCPKSCKNRFRGCHCAKSQCRSRQCPCFAADRECDPDVCRNCWVSCGDGTLGIPSQRGDNYECRNMKLLLKQQQKVLLGRSDVSGWGAFLKNSVGKHEYLGEYTGELISHREADKRGKIYDRENSSFLFNLNDQFVLDAYRKGDKLKFANHSPVPNCYAKVIMVAGDHRVGIFAKERINAGEELFYDYRYEPDRAPVWARKPEAPGSKKEDGAPSSGRAKKLA 864
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g07222 864 ProSiteProfiles SET domain profile. 715 830 IPR001214 GO:0005515
Vifa1g07222 864 MobiDBLite consensus disorder prediction 380 407 - -
Vifa1g07222 864 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 1 864 IPR025778 GO:0031519
Vifa1g07222 864 MobiDBLite consensus disorder prediction 349 482 - -
Vifa1g07222 864 MobiDBLite consensus disorder prediction 839 864 - -
Vifa1g07222 864 MobiDBLite consensus disorder prediction 1 32 - -
Vifa1g07222 864 ProSiteProfiles CXC domain profile. 601 700 IPR026489 -
Vifa1g07222 864 SMART set_7 715 836 IPR001214 GO:0005515
Vifa1g07222 864 FunFam Putative histone-lysine N-methyltransferase EZH2 615 832 - -
Vifa1g07222 864 Gene3D SET domain 615 832 IPR046341 -
Vifa1g07222 864 CDD SET_EZH 715 831 - -
Vifa1g07222 864 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 33 862 IPR045318 GO:0006338|GO:0042054
Vifa1g07222 864 MobiDBLite consensus disorder prediction 1 24 - -
Vifa1g07222 864 MobiDBLite consensus disorder prediction 430 454 - -
Vifa1g07222 864 MobiDBLite consensus disorder prediction 349 363 - -
Vifa1g07222 864 Pfam CXC domain 653 684 IPR041355 -
Vifa1g07222 864 SUPERFAMILY SET domain 589 835 IPR046341 -
Vifa1g07222 864 MobiDBLite consensus disorder prediction 839 857 - -
Vifa1g07222 864 SMART CXC_2 649 686 IPR033467 -
Vifa1g07222 864 Pfam SET domain 726 829 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g07222 Vifa-Chr1 1115630198 1115637117 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g07222 704 833 C2H2 Transcription Factor Family AT2G23740 27.891 6.74e-10 61.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Vifa1g07222 SET 2.2e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g07222 - K11430 gmx:100809840 1444.87