Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g07210 ATGTTTTCATTTCTCAAATATGTAATCTTGATATGTGTGTTAATGTTGCTATTGGGGAACAATATACTTGGAGTTCATGAGAATATTGTTAATTCTTTAGACGGAAATTTAGATTTAACTGTTCATTGTAAATCTAAAGACGATGATCTAGGAGTTCATCTTTTACATCACGGTGAAAATTATAGTTGGAGTTTTCAACCTAGACGAATTATTGGCCACACGCTATTCTTTTGTGGTTTTACATGGAATGGTGAACTCCATTGGTTTGATATTTACAACAATGATGAGCTTAGAATTGGATGTGAAAATTGCAACTGGAATATATTCAAATCTGGACCATGTAAAACTGAAAAAGATGGACGATCTACTTGCTTTCGATGGAATAAGTAG 390 0.3256 MFSFLKYVILICVLMLLLGNNILGVHENIVNSLDGNLDLTVHCKSKDDDLGVHLLHHGENYSWSFQPRRIIGHTLFFCGFTWNGELHWFDIYNNDELRIGCENCNWNIFKSGPCKTEKDGRSTCFRWNK 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g07210 129 PANTHER - 26 118 IPR010264 -
Vifa1g07210 129 Pfam Plant self-incompatibility protein S1 28 127 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g07210 Vifa-Chr1 1113993539 1113993928 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g07210 29 128 Carbohydrate Esterase AT3G16970 47.170 1.11e-25 92.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g07210 - - psat:127136024 167.162