Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g07209 ATGCCTCCATTTCACCAAAAGGTTATCCTTCTATATGTGTTAATATTGTTATCGGGGCATAATGTTCTTGGAACTCATGAGAATATTATTAATTGTTTGGAAGGAAATTTGGATTTAATTGTTCATTGCAAATCTAAAGATGATAATCTTGGTGCTCATCTTTTACATTATGGTGAAAGCTTTGGTTGGAAATTTCAACCTAAAGTTGTTTTTGGCCATACAGTATTCTTTTGTGGTTTTACATGGAATGGTAAATTACATTGGTTTGATGTATACGACATGGTGATTATCTTAAAGATGATTGTGATGAATGCATTTGGAAAATATTCAAATCAGGACCATGTAGAAAAGAAGATGATGGGCAGTCTACTTGCTTTCTGTGGAATAAGCAATAAATAA 399 0.3208 MPPFHQKVILLYVLILLSGHNVLGTHENIINCLEGNLDLIVHCKSKDDNLGAHLLHYGESFGWKFQPKVVFGHTVFFCGFTWNGKLHWFDVYDMVIILKMIVMNAFGKYSNQDHVEKKMMGSLLAFCGISNK 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g07209 132 PANTHER - 25 94 IPR010264 -
Vifa1g07209 132 Pfam Plant self-incompatibility protein S1 28 93 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g07209 Vifa-Chr1 1113603066 1113603464 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g07209 18 92 Carbohydrate Esterase AT3G16970 46.667 7.21e-16 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g07209 - - psat:127136024 120.168