Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g07204 ATGACAAGTATTATAAGAGAAAAATTGAAGCTTATTGTGGGATTAATTGTTCTACAATTTTGTTTTGCAGGATTTCACATTGTCTCTAGACTTGCACTAAACATTGGTGTTAGCAAAGTTGTTTATGCTATTTATAGAAATTTCATTGCCTTGATTTTGTTGACTCCATTTGCTTACTTTTTAGAAAAAAATCAAAGACCACCTCTTACATTATCTTTGTTGGTTCAGTTCTTCCTATTGGCATTATTGGGAATTACTGCAAACGAAGGATGTTACTTGTTGGGAATGTATTATGCTTCTCCAACTTTAGCTTCTGCAATGCAAAACTCAGTTCCTGCCATCACTTTTATCTTTGCCTCAACTTTAAGACTTGAGGAAACCAACATTGCAAGAAGAGAAGGAATAGCAAAAGTTGTAGGAACCATTGCAAGTATAGGAGGTGCTATTGTAATTACTCTTTACAAAGGTCCTCCTCTTCTTCACTTGCAAATGAACCAAATACAAGAAAACATCACCTTACAAATAGATGAGTCTTCAACCAATAACCAAAATTGGACATGGGGCTGCATATTCTTGCTTGGACATTGTTTATCATGGGCTGGTTGGATAGTTTTTCAGGATCCTGTTGTGAAGAAGTATCCAGCTAAACTCACAATGACTTCATTTTCATGTTTTTTTGGATTGATCCAATTCTTGATCATTGCAATCTTTACAGAAAATGATTTTGAAAAGTGGAAGATAAAATCACTAGAAGAGCTTTCTACCATCCTATATGCTGGAATTGTAGCATCAGGGGTTATGTTATCTCTCCAAACATGGTGTATTCAAAAGGGTGGTCCTGTCTTTGTTGCTGTGTTCCAACCATTACAAACTTTCCTTGTTGTTCTCATGGCTGCACTTATTCTTGGAGATCAATTATACTCTGGAGGGATTATTGGTGCTATTTTCATTGTTCTGGGTCTATACTTGGTTCTATGGGGCAAAGCCAACGAAAGAAAGACGATTGAACCATTGATAACAAGGCCATTGCTTGATTCAGACGAAGAGAATAACATTATTGGTGCAGCTTCAAAAGACTTATCTTAA 1086 0.36 MTSIIREKLKLIVGLIVLQFCFAGFHIVSRLALNIGVSKVVYAIYRNFIALILLTPFAYFLEKNQRPPLTLSLLVQFFLLALLGITANEGCYLLGMYYASPTLASAMQNSVPAITFIFASTLRLEETNIARREGIAKVVGTIASIGGAIVITLYKGPPLLHLQMNQIQENITLQIDESSTNNQNWTWGCIFLLGHCLSWAGWIVFQDPVVKKYPAKLTMTSFSCFFGLIQFLIIAIFTENDFEKWKIKSLEELSTILYAGIVASGVMLSLQTWCIQKGGPVFVAVFQPLQTFLVVLMAALILGDQLYSGGIIGAIFIVLGLYLVLWGKANERKTIEPLITRPLLDSDEENNIIGAASKDLS 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g07204 361 Pfam EamA-like transporter family 12 152 IPR000620 GO:0016020
Vifa1g07204 361 Pfam EamA-like transporter family 187 325 IPR000620 GO:0016020
Vifa1g07204 361 SUPERFAMILY Multidrug resistance efflux transporter EmrE 45 154 - -
Vifa1g07204 361 PANTHER WAT1-RELATED PROTEIN 13 332 IPR030184 GO:0016020|GO:0022857
Vifa1g07204 361 SUPERFAMILY Multidrug resistance efflux transporter EmrE 249 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g07204 Vifa-Chr1 1113128409 1113130971 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g07204 4 333 Nodulin-like Gene Family AT3G18200 67.879 2.33e-165 465
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g07204 - - vra:106768622 549.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g07204 1 1113128409 1113130971 Vifa1g07204 1 1113128409 1113130971 ECH