Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vifa1g07203 | ATGAGCGAATTTGCAGAGACCCACAAGCGCGAAGCTGATTCCGAAATCAAGGAGGAAGTTTCTGCATCGAAGAAGTCAAGGGTTGAATCTTCGGAAGATAATGCTTCAAAGGAAGTATCTTTCCGCATTGAAGCAGACGCGGCTGAGGATAAAGGATTGAGACAAACAATGGAAGATGAATGGGTTGTTCTTCTCGATGCAGCTCGAGATTACCCTGGGAATTTGAGATGTGCTCACTTTGCAATTTATGATGGACATGGGGGCCGGTTAGCTGCAGAATATGCTCAAAAGCATTTGCATGGAAATGTTCTTGCAGCAGGATTACCACGTGAGTTGTTGGATGTAAAGACCGCTAAACGATCTATACTTGATGGTTTTCGTAAAACTGATGAGTCTATTCTTCAAGCAAGTGCTGAAGGCGGATGGCAGGATGGTGCTACAGCTGTATGTGTTTGGGTATTAGGACAAAAAGCTTTTGTCGCAAATGTTGGAGATGCAAAAGCAGTTTTAGCTCGGTCAGTTGTAACCGTTGGATCCGAAGATAACTCAGATGAAGTCCACACTCTCAAGGCCATTGTTTTGACAAGAGAACACAAACCTATATTCCCACAGGAGCGTTCACGCATTCAGAAGGCTGGTGGTATTGTGAGCTCAAATGGACGATTACAAGGGCGTCTTGAAGTATCTAGGGCTTTTGGAGATCGGCAATTCAAAAAGGTGGGTCTTGTTGCAACCCCAGATATCCATTCATTTGACCTTACAGATAGAGATCATTTCATCATACTTGGTTGTGATGGATTGTGGGGGGTATTTGGTCCCAGTGATGCTGTTGATTTTGTTCAGAAGTTGTTGAATGAGGGACTATCTGTAACAGTTGTAAGCCGCCGTCTTATAAGGGAAGCTGTTCGAGAGCGTCGATGCAAAGATAACTGCACTGCAGTTGTCATTGTATTCAAGCGAAATTAA | 966 | 0.4389 | MSEFAETHKREADSEIKEEVSASKKSRVESSEDNASKEVSFRIEADAAEDKGLRQTMEDEWVVLLDAARDYPGNLRCAHFAIYDGHGGRLAAEYAQKHLHGNVLAAGLPRELLDVKTAKRSILDGFRKTDESILQASAEGGWQDGATAVCVWVLGQKAFVANVGDAKAVLARSVVTVGSEDNSDEVHTLKAIVLTREHKPIFPQERSRIQKAGGIVSSNGRLQGRLEVSRAFGDRQFKKVGLVATPDIHSFDLTDRDHFIILGCDGLWGVFGPSDAVDFVQKLLNEGLSVTVVSRRLIREAVRERRCKDNCTAVVIVFKRN | 321 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vifa1g07203 | 321 | CDD | PP2Cc | 48 | 318 | IPR001932 | - | |
Vifa1g07203 | 321 | ProSiteProfiles | PPM-type phosphatase domain profile. | 44 | 318 | IPR001932 | - | |
Vifa1g07203 | 321 | PANTHER | PROTEIN PHOSPHATASE 2C | 25 | 316 | IPR015655 | GO:0004722|GO:0006470 | |
Vifa1g07203 | 321 | MobiDBLite | consensus disorder prediction | 1 | 38 | - | - | |
Vifa1g07203 | 321 | SMART | PP2C_4 | 40 | 316 | IPR001932 | - | |
Vifa1g07203 | 321 | FunFam | Probable protein phosphatase 2C 67 | 32 | 320 | - | - | |
Vifa1g07203 | 321 | Gene3D | - | 22 | 320 | IPR036457 | - | |
Vifa1g07203 | 321 | SUPERFAMILY | PP2C-like | 40 | 319 | IPR036457 | - | |
Vifa1g07203 | 321 | Pfam | Protein phosphatase 2C | 48 | 306 | IPR001932 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vifa1g07203 | Vifa-Chr1 | 1112864669 | 1112870138 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vifa1g07203 | 29 | 270 | PP2C-type Phosphatase Gene Family | AT1G18030 | 71.545 | 3.94e-129 | 369 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vifa1g07203 | K17500 | - | mnt:21396468 | 479.944 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Vifa1g07203 | 1 | 1112864669 | 1112870138 | Vifa1g07203 | 1 | 1112864669 | 1112870138 | ECH |