Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g07194 ATGAGAGTTGAGGAAGGTGAATGTAAAAGAAGGATTTTGCTTACATCAACTTCAGAGGTATATGGGGATCCTCTTGAGCATCCTCAACTTGAAACCTATTGGGGAAATGTTAACCCTATTCGAGTTCTTAGTTGCTATGATGAAGGGAAACGTGTGGCTGAGACTTTGATCCAAGTTTTGAGAAGTGGTTGCTGCAATCCCATTGCCAGTTGTAGCAGCTGTTTATTGCGTCCTCTTTGCCTACGTCGCAACCAATCAATAGTCATTGTCGGCTTTTCTCTCTTCATCGGTCTATCTGTTCCACAATATTTCAATGAATATTTGGCCCTATCTAGACACGGCACGGTTCACACTGGCTCTACTTCATTCAACAATATAGTGCAAGTTATTTTCTCATCTCCAGCAACTGTGGCAATTATAGTTGCTTACTTATTGGATTCCACAACGAGCCTTGAAAAATGTACATATATGCTCTGTAAGATCGACAAGTCAGGTTGCTTGTCTGGAAAATCAGTCGATAATGAAGTTGAAGAAGAAATTCTCTTAGGCCATCCTGACTATGTTCTGGACCGTATTGATAACATCGATACGAAGGTGGCACTTCTTGCTCCATGTGTACGGAGGGGCTTAAAGGTTATATCTGCCACTGGGGATGGTGCTAGAACTGATCCAACAAGAATACACATTGCTGATCTAAGAGAATCTACTAATGATCCATTATCTCGATCGATCGACACGTTGCTATTAATATTGTCAATAGAATTAGTTCAAGAATTCAAAAAAAGGGACTTGTCTCAGAGAATAACTATTGTATATGGCCTTGACAAGAGAACTAATTGTGTGGGAGAACGGAATATTTTTGTCTTCGACCTTGGTGGTGGGACTTTTGATGTGTCTCTTCTTACTATTAAGGATAAGGTCTTCCAGGTTAAGGCTACTGCAGGAAACACTCACCTTGGAGGAGAGGACTTTGATAATAGAATGGTGAACTATTTTGTAGAGGAGATCAAAAGGAAGAAAAAGTTAGACATTGTTGGTAACCCGAAAGCCTTGAGGAGACTGAGAACAATGTTGATCTAA 1080 0.4037 MRVEEGECKRRILLTSTSEVYGDPLEHPQLETYWGNVNPIRVLSCYDEGKRVAETLIQVLRSGCCNPIASCSSCLLRPLCLRRNQSIVIVGFSLFIGLSVPQYFNEYLALSRHGTVHTGSTSFNNIVQVIFSSPATVAIIVAYLLDSTTSLEKCTYMLCKIDKSGCLSGKSVDNEVEEEILLGHPDYVLDRIDNIDTKVALLAPCVRRGLKVISATGDGARTDPTRIHIADLRESTNDPLSRSIDTLLLILSIELVQEFKKRDLSQRITIVYGLDKRTNCVGERNIFVFDLGGGTFDVSLLTIKDKVFQVKATAGNTHLGGEDFDNRMVNYFVEEIKRKKKLDIVGNPKALRRLRTMLI 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g07194 359 Gene3D - 159 281 - -
Vifa1g07194 359 ProSitePatterns Heat shock hsp70 proteins family signature 2. 288 301 IPR018181 -
Vifa1g07194 359 Gene3D - 4 90 - -
Vifa1g07194 359 Pfam Hsp70 protein 268 356 IPR013126 GO:0005524|GO:0140662
Vifa1g07194 359 PANTHER HEAT SHOCK PROTEIN 70KDA 269 356 IPR013126 GO:0005524|GO:0140662
Vifa1g07194 359 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 8 61 IPR036291 -
Vifa1g07194 359 SUPERFAMILY Actin-like ATPase domain 283 357 IPR043129 -
Vifa1g07194 359 Gene3D - 282 359 - -
Vifa1g07194 359 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 175 243 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g07194 Vifa-Chr1 1111037919 1111041088 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g07194 269 356 Calmodulin-binding Proteins AT5G02500 73.864 1.19e-40 148
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g07194 K03283 - ccaj:109794867 162.54