Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g07159 ATGGTGAAAGGACGTCAAGGCGAGCGTGTTAGGCTTTATGTGAGGGGCACAATTCTTGGATACAAGAGATCCAAATCAAACCAGTACCCAAACACATCTCTGGTCCAAATCGAAGGAGTTAACACCAAGGAGGAGGTAGCTTGGTATGCCGGCAAGCGATTGGCATATATCTACAAGGCCAAGGTGAAGAAGAATGGAACCCATTACCGCTGCCTATGGGGAAAGGTTACAAGGCCACACGGAAACAGTGGTATTGTTCGTGCCAAATTCACATCAAATCTTCCTCCCAAATCAATGGGATCAAGGATAAGAGTATTTATGTATCCCAGGTTTTCAACTCACCACCGATTCACGCTCCTTCATCATCTGCTTATCCAATCCGCAGCTTTTCTGCCTCCAAGACCACCAAACAGAACTGTAACACCTCCACACTTCTATATCCGCACTACCGGCTACTCCACAACCACCAACCAGACAGTTTCTCGTCAACCAACAATCGCGCACCTCTCAACAACTGCACTGCACCCAACTCACCAATCTGACCATCAATTCATCCGCACCAAGCCTCCGCTACCCGACACCTCCAGATCCACGACACCATCCTCTGACCATACACTTTGCCACGGTTTCAGTCGTTCTCTTCTCATACACACTATTTGTGTGACTTGA 669 0.4798 MVKGRQGERVRLYVRGTILGYKRSKSNQYPNTSLVQIEGVNTKEEVAWYAGKRLAYIYKAKVKKNGTHYRCLWGKVTRPHGNSGIVRAKFTSNLPPKSMGSRIRVFMYPRFSTHHRFTLLHHLLIQSAAFLPPRPPNRTVTPPHFYIRTTGYSTTTNQTVSRQPTIAHLSTTALHPTHQSDHQFIRTKPPLPDTSRSTTPSSDHTLCHGFSRSLLIHTICVT 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g07159 222 Gene3D translation elongation factor selb, chain A, domain 4 6 111 IPR038661 -
Vifa1g07159 222 FunFam 60S ribosomal protein L35a 7 112 - -
Vifa1g07159 222 SUPERFAMILY Translation proteins 12 106 IPR009000 -
Vifa1g07159 222 Hamap 50S ribosomal protein L35Ae [rpl35ae]. 14 106 IPR001780 GO:0003735|GO:0005840|GO:0006412
Vifa1g07159 222 Pfam Ribosomal protein L35Ae 12 106 IPR001780 GO:0003735|GO:0005840|GO:0006412
Vifa1g07159 222 MobiDBLite consensus disorder prediction 176 203 - -
Vifa1g07159 222 PANTHER 60S RIBOSOMAL PROTEIN L35A 2 109 IPR001780 GO:0003735|GO:0005840|GO:0006412
Vifa1g07159 222 ProSitePatterns Ribosomal protein L35Ae signature. 74 95 IPR018266 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g07159 Vifa-Chr1 1104843398 1104845328 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g07159 1 109 Cytoplasmic Ribosomal Protein Gene Family AT1G74270 91.743 7.56e-74 217
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g07159 K02917 - jre:108991888 221.476