Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g07153 ATGGTTATGGATAGCATAGATACTCCGTCTCCACCGTCTCAGTCTCAGTATCAGATCGGCCACCCGCGCCATTTCTACCTCGCAGTAGACAGGCTTCAATTCAAAATGCAAACGTTGGTTGATCTTCTCGATTTGGTGGGTCGGCGTTCTTGCTTACCCATTGTTGTCTGTTGCAGCACTCGCGATGACCTTGACTCTCTCTGTTCTTCTCTTTCACCTCTCCCTTTCATCTCCTCTTCCGCTTTGTATAGTGACCTTGCTGAAGACGAGCGTGCTTTTGTTTTAGAGAAGTTTGGTCAAGTGGCGACAAGGTGGAATCAGGTTAATCATGCTGGAGCAGGAAATGATGATGATGTTGGGAAAGATGATAGATCTCACATGGTTATTGTTACAGATGCTTGCCTTCCTCTTCTTACTTCTGGGGAGTCTGCCATGAATGCCCATCTTCTCATTAACTATGAGTTACCAGCTAAAAAGGAAACATATGGAAGGCGGTTGGCAGCTTGTCTAGCAGCTGATGGAATTGTTATCAATATGGTTGTCGGTGGAGAAGTGGTAACTCTAAAAAGTATTGAAGAAAGCACCGGTATTGTCATGCAAGAGATGCCAATGCAAATTCTTGACATTTTATGA 633 0.4455 MVMDSIDTPSPPSQSQYQIGHPRHFYLAVDRLQFKMQTLVDLLDLVGRRSCLPIVVCCSTRDDLDSLCSSLSPLPFISSSALYSDLAEDERAFVLEKFGQVATRWNQVNHAGAGNDDDVGKDDRSHMVIVTDACLPLLTSGESAMNAHLLINYELPAKKETYGRRLAACLAADGIVINMVVGGEVVTLKSIEESTGIVMQEMPMQILDIL 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g07153 210 Gene3D - 18 210 IPR027417 -
Vifa1g07153 210 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 23 207 IPR027417 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g07153 23 210 Eukaryotic Initiation Factors Gene Family AT3G19760 24.737 4.81e-14 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g07153 - K03257 gmx:100791017 302.753
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g07153 1 1103784948 1103787304 Vifa1g07153 1 1103784948 1103787304 ECH