Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g07142 ATGGTGATGGCTCAGGTAGGTGTCAGAACTCGAGCTCGAGCCGCATTAGCCATGGAAGTCACAAGTTCACCTCCACCAACTTCAAAGAGAAGAAAGATCAACAACAGAACCGAAAACCGTAAATTCTCAACCGTCAAGGAAAATTCCTTCGATGAAGAATCTCCGGCGTCGTGTTGTTCAAGCAACGGATCCGTTGGACTCGATGAACAAAGGATCAAATCGTTAGATCTGGAGGTGGAGAGCGCGCAAGGTGAAACATCAACGTGCAATTGCGATGAAGAAATTGAGAGGAGAGAGATGAGTCGTTCAAGCGAGTTTCGAGGAAATTCTCATGAGCTTGAGTTAATGGAGACCGATTCTCACCGTCCGATTTCATCTGCAAAAAATACGCCAACGGAATTTGAGCTTGAAGAATTTTTCGCTGCTGCTGAGAAAGACATTCAGAAAAAGTTTCAAGAAAAGTATAATTATGATATTCTGAAGGACCTTCCATTGGAAGGACGCTACGAGTGGGTTCAGTTGAAGCCATGA 531 0.4444 MVMAQVGVRTRARAALAMEVTSSPPPTSKRRKINNRTENRKFSTVKENSFDEESPASCCSSNGSVGLDEQRIKSLDLEVESAQGETSTCNCDEEIERREMSRSSEFRGNSHELELMETDSHRPISSAKNTPTEFELEEFFAAAEKDIQKKFQEKYNYDILKDLPLEGRYEWVQLKP 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g07142 176 Pfam Cyclin-dependent kinase inhibitor 131 174 IPR003175 GO:0004861|GO:0005634|GO:0051726
Vifa1g07142 176 MobiDBLite consensus disorder prediction 49 65 - -
Vifa1g07142 176 MobiDBLite consensus disorder prediction 99 129 - -
Vifa1g07142 176 PIRSF CKI_KRP_plant 3 176 IPR044275 GO:0004861|GO:0045736|GO:0051726
Vifa1g07142 176 Gene3D p27 124 176 IPR044898 -
Vifa1g07142 176 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR 4-RELATED 5 175 IPR044275 GO:0004861|GO:0045736|GO:0051726
Vifa1g07142 176 MobiDBLite consensus disorder prediction 31 48 - -
Vifa1g07142 176 MobiDBLite consensus disorder prediction 15 65 - -
Vifa1g07142 176 MobiDBLite consensus disorder prediction 99 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g07142 Vifa-Chr1 1102559122 1102560259 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g07142 130 176 Core Cell Cycle Gene Families AT1G49620 65.957 5.74e-18 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g07142 - - tpra:123908811 213.772