Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g07095 ATGGAAACTTGTCCAAGCCTTACCAGAATTGTTAGATCCAATATCTTGTCAGCTATAGCCAATGACTCAAGAATTGCAGCGTCTCTCTTGCGCCTTCACTTCCATGATTGTTTTGTCAATGGATGCGATGGATCAGTACTACTCGATGATACAGACACTCTAAAAGGAGAGAAAAATGCATTGCCTAATCAAAATTCGTTAAGAGGATTCGATGTAATAGACAAAATAAAGTCTGATTTAGAGAGTGCTTGTCCATCCACAGTTTCATGTGCTGATATACTTACTCTAGCAGCAAGAGATGCTATATATCTAAGTAAAGGGCCATTTTGGGCTGTACCTCTCGGTCGTAGAGATAGCACAACAGCGAATGAGAGTGAAGCAAATAACTTGCCATCACCCTTTGAGCCTCTTGAAAACATTACTGCTAAGTTTGTTTCCAAAGGGCTAGAAAAGAAGGATGTAGCAGTGCTCTCAGGTGCACACACATTTGGCTTTGCTCAATGTGTTTTATTCAAGTCAAGACTCTTCGACTTTGGTGGCTCTGGTAAACCCGATCCATCACTTGATTCGTCGCTTCTACAAAATTTACAGAAAATATGTCCAAATCAAGCTGATTCTAATACCAACTTGGCCCCGTTGGATCCTGTCACTACAAATATATTTGATAACACATATTACAAAAATGTTTTGAGCAATAATGGGTTACTTCAATCAGACCAAGCACTTTTGGGTGATAATATTACTTCTTCGTTGGTTAACAATTATAGCAAGTGGCCTATTTTGTTTTTCAGAGACTTTGCTGTTTCTGTTGAGAAAATGGGTCGTATTGGTGTTCTTACAGGACAGCAGGGTCAAATAAGGACTAACTGTAGGGCTGTTAATTAG 885 0.3932 METCPSLTRIVRSNILSAIANDSRIAASLLRLHFHDCFVNGCDGSVLLDDTDTLKGEKNALPNQNSLRGFDVIDKIKSDLESACPSTVSCADILTLAARDAIYLSKGPFWAVPLGRRDSTTANESEANNLPSPFEPLENITAKFVSKGLEKKDVAVLSGAHTFGFAQCVLFKSRLFDFGGSGKPDPSLDSSLLQNLQKICPNQADSNTNLAPLDPVTTNIFDNTYYKNVLSNNGLLQSDQALLGDNITSSLVNNYSKWPILFFRDFAVSVEKMGRIGVLTGQQGQIRTNCRAVN 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g07095 294 Gene3D - 2 294 - -
Vifa1g07095 294 ProSitePatterns Peroxidases proximal heme-ligand signature. 153 163 IPR019793 -
Vifa1g07095 294 FunFam Peroxidase 131 273 - -
Vifa1g07095 294 ProSiteProfiles Plant heme peroxidase family profile. 1 294 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa1g07095 294 Gene3D Peroxidase, domain 2 131 273 - -
Vifa1g07095 294 FunFam Peroxidase 1 148 - -
Vifa1g07095 294 CDD secretory_peroxidase 2 293 IPR033905 GO:0004601|GO:0042744
Vifa1g07095 294 PRINTS Plant peroxidase signature 268 281 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa1g07095 294 PRINTS Plant peroxidase signature 212 227 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa1g07095 294 PRINTS Plant peroxidase signature 4 23 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa1g07095 294 PRINTS Plant peroxidase signature 152 164 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa1g07095 294 PRINTS Plant peroxidase signature 28 48 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa1g07095 294 PRINTS Plant peroxidase signature 106 121 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa1g07095 294 PRINTS Plant peroxidase signature 68 81 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa1g07095 294 PRINTS Plant peroxidase signature 87 97 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa1g07095 294 PRINTS Plant peroxidase signature 228 245 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa1g07095 294 PANTHER PEROXIDASE 72-RELATED 2 293 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vifa1g07095 294 SUPERFAMILY Heme-dependent peroxidases 2 294 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vifa1g07095 294 PRINTS Haem peroxidase superfamily signature 106 118 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa1g07095 294 PRINTS Haem peroxidase superfamily signature 214 229 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa1g07095 294 PRINTS Haem peroxidase superfamily signature 153 168 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa1g07095 294 PRINTS Haem peroxidase superfamily signature 88 105 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa1g07095 294 PRINTS Haem peroxidase superfamily signature 26 40 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa1g07095 294 ProSitePatterns Peroxidases active site signature. 26 37 IPR019794 GO:0004601
Vifa1g07095 294 Pfam Peroxidase 12 256 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g07095 Vifa-Chr1 1096113781 1096114970 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g07095 2 290 Peroxidase AT1G49570 63.014 7.52e-131 374
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g07095 K00430 - gmx:100815708 496.508