Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g07063 ATGGCAACTAAAAGGTTTTTTGATGATTCTGGTGATCATGATCAAGATCAAGATCAAGATCGAGATCATCCAAACGACAAAAGAATGAAACCTACTTTAGCTTCTGTAATTGAAAAAGCAGTTAAAATGGAAAACATGCAGAAACTTTTAGCAGCTTTGGAACCTTTTCTTCAAAGAGTGGTGAGTGAAGAGGTGGATAAAACAATAAGAAAGTGCTTTCCATGTTCCATCAATAGGTCACCTTCTTTAAGAATCCAAACACCAAATCATCAACAATCAACCTTGCAACTCTCATTCAACAAAAAAGTTCCCCTCACAATTTTCACGGGTAGCAGAATACTTGACATTGAAGGTAACCCAATGAACATAATTCTTGTTGAAAAAACCAACAATAACCAAATTGTTCAAACAAGTCTTCCTTACCCTATAAAGCTGGAGATTGTTGTTCTGGATGGAGATTTTCCCCTTGAAGAAAAAGAGGATTGGAGTAGTGAGGAATTCAATAGAAAAATAGTGAAAGAAAGATCTGGGAAAAGACCATTGCTCTCCGGCGAAATGAACCTTACTATGAGAGATGGAGTTGCAGCAATTGGAGACATAGATTTCACTGATAATTCAAGCTGGATAAAGAGTAGAAAGTTTAGAGTTGCAGTGAAAGTGAAAGTGATTCCTCATGGGAATAATCAAAGTGTTAGGATTCAAGAAGCAATGACTGATGCATTTGTTGTTAAAGATCATCGCGGAGAATTGTACAAAAAGCACTACCCACCAATGCTTGATGATGATTTGTGGCGGCTAGAGAAAATAGGAAAAGGTGGAGCTTTTCACACAAGAATGACTTCTGAAGGGATCAAAACAGTGCAAGACTTTCTTAAATTAGCTGTTATTGATTCTGAAAAACTAAGAAAGATTTTGGGCGTTGGGATGTCAGATAGAATGTGGGAAGTGACATTAAAGCATGCAATGACATGTGACATGGGAAGCAAGATTTATATATACCGTCAACCTCAAGTTGTAATTTATCTGAATCCCATTTGCAAATTAATTAAAGCTAATATCAATGGACATGAATTTTCAATCACAGGGTTCAGCCAAATCAATAAGAGCTATATAGACAAATTGGTTAAAGAAGCATACACAAAATGGGATGAGTTGGAGGAAATTGGTGTGGTTTTAAATGATAACATTGCTTTGTTAACCCAAGATGATCAAATTGGGAATCATTATCCAAATAATAATCAAGCATCGGTAGTGACAACACTTCATCAAAATATTGCTAGCTATGTACCAAGCAATAAAGTACAAATGGGAGCCTCTGAATGGTCACTCAATCAAGGATATGCCACAACATCATTTACAAATGATTTATCTTATGATTTTTCATGTTTACAATCAGATGGAGAAATCACACCTTCAAGTTCAAGTCTTTGA 1431 0.3578 MATKRFFDDSGDHDQDQDQDRDHPNDKRMKPTLASVIEKAVKMENMQKLLAALEPFLQRVVSEEVDKTIRKCFPCSINRSPSLRIQTPNHQQSTLQLSFNKKVPLTIFTGSRILDIEGNPMNIILVEKTNNNQIVQTSLPYPIKLEIVVLDGDFPLEEKEDWSSEEFNRKIVKERSGKRPLLSGEMNLTMRDGVAAIGDIDFTDNSSWIKSRKFRVAVKVKVIPHGNNQSVRIQEAMTDAFVVKDHRGELYKKHYPPMLDDDLWRLEKIGKGGAFHTRMTSEGIKTVQDFLKLAVIDSEKLRKILGVGMSDRMWEVTLKHAMTCDMGSKIYIYRQPQVVIYLNPICKLIKANINGHEFSITGFSQINKSYIDKLVKEAYTKWDELEEIGVVLNDNIALLTQDDQIGNHYPNNNQASVVTTLHQNIASYVPSNKVQMGASEWSLNQGYATTSFTNDLSYDFSCLQSDGEITPSSSSL 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g07063 476 MobiDBLite consensus disorder prediction 1 29 - -
Vifa1g07063 476 PANTHER OS02G0177800 PROTEIN 1 454 IPR012416 GO:0005516
Vifa1g07063 476 Pfam Calmodulin binding protein-like N-terminal domain 95 246 IPR046831 -
Vifa1g07063 476 Pfam Calmodulin binding protein C-terminal domain 329 388 IPR046829 -
Vifa1g07063 476 Pfam Calmodulin binding protein central domain 258 324 IPR046830 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g07063 Vifa-Chr1 1091091591 1091093672 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g07063 20 387 Calmodulin-binding Proteins AT4G25800 46.791 1.10e-110 338
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g07063 - - gmx:100803213 565.459