Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g07054 ATGTCTCAATTTATGCAGAAAGTTTTATTACTATGTGTGTTGATGCTTTTATCATCTCACAATATAGTAGCAATTCATGTGAATATTGTAAACTCTTTAAAAAATAGATCGAGTTTAACTATTCATTGCAAATCTGCAGATGATGATCTTGGAGTTCATATTCTACAATATGGTGATAGTTATGGCTTTAAATTTGGTGTCAAAATGTTTGCAGATACACTATTCTTTTGTGGCTTTACATGGAATGGTGTACTACATCGGTTTGATATATATATAGACAGTGATTTCAAAAGATCTGATTGTAGTCACTGCGAGTGGCAAATTTTTGAATCAGGACCATGTCGAATTCTAAAACCTGGGGCGTTTGCTTGCTTTCCGTGGGATAAGAACAAATAA 396 0.3308 MSQFMQKVLLLCVLMLLSSHNIVAIHVNIVNSLKNRSSLTIHCKSADDDLGVHILQYGDSYGFKFGVKMFADTLFFCGFTWNGVLHRFDIYIDSDFKRSDCSHCEWQIFESGPCRILKPGAFACFPWDKNK 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g07054 131 PANTHER - 26 115 IPR010264 -
Vifa1g07054 131 Pfam Plant self-incompatibility protein S1 26 127 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g07054 Vifa-Chr1 1090135127 1090135522 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g07054 27 128 Carbohydrate Esterase AT3G16970 41.121 2.03e-22 84.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g07054 - - psat:127136024 145.976