Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g07053 ATGTGGTCTGCAAAACATTCATTTTTCTTAGAACTCATCACTATTCTTTTTTCTCTGTTACATTCATCTGTTTTAGCAGAGAAAAAATCTTACATAGTGTACCTGGGATCACATGATCATGGTGAAGGAGTTACAGAAGCAGATTTCGATCGAGTTACATACACTCATCATGAATTCCTTCAATCCTACGTTGGAAGTTATGAGAAAGCAAAAGAGTCCATGATATATTCTTACACAAGGAACATCAATGGTTTTGCAGTAATTCTTGATGAGAAAGAAGCTGCTGACATCGCAGAACATCCAAACGTTGTGTCAGTGTTGTTAAACCGAGGTAGAAAGTTACACACGACACGCTCGTGGGAATTCATGTCAATGGAACACAATGGTGTTGCACCAACTGGATCCATCTTTAGAAAAGCTAGATATGGAGAAGATACAATTATTGGGAATCTTGATACTGGTGTATGGCCGGAAAATCCAAGCTTTGGAGATCACGGGATAGGTCCAATTCCTTCGAGGTGGAAAGGAACTTGTCAAGGAGATGATCTTTCTATCGGCTTCCGTTGCAACAGGAAGCTGATAGGAGCAAGGTACTTCAACAAAGGTTACTTGGCCGATGCAGGTTCAGATGCGAAATATAACAAAACACTTAACACTGCAAGAGACTACGAAGGTCATGGATCTCACACGTTATCAACAATAGGAGGAAACTATGTTTCTGGAGCTAATGTTTTCAGCTTTGGAAATGGAACTGCAAAAGGTGGTTCTCCGAAAGCAAGAGTTGCGTCTTACAAAGTATGCTGGCCACCGGTTATTAAAGACGAAGATTGTTATGATGCTGATATCATAGCCGCTTTTGATATGGCTATTCATGATGGAGTTGATGTTCTATCTCTTTCTCTTGGTAGTGATGCTGCTGAATATTTTGAGGATGCTCTTTCAATTGCTGCATTTCATGCGGTTAAGAAAGGTATCACTGTGGTATGCTCAGCTGGAAATTCTGGACCAAAACCTGGAACTGTTTCAAATATTGCACCTTGGATATTAACCGTTGCTGCAAGCACCTTAGATAGAGAGTTTTATGCTTCTGTTTCTCTCCTTGATGGACAAAGCTTCAAGGGTGCTAGCTTTTCTAGTCCTTTGCCAGAGAACAAGTTTTATCCATTAATCAGTGCTGCTGATGCAAAACTAGATGAAGCATCTGTTGAAAACGCTGCTTTGTGTATTAATGGAACTATTGACCCTAAGAAAGTAAAGGGAAAAATATTGGTTTGTCTTACAGGTGTTAATGCAAGAGTGGAAAAGGGTCTTTCTGCTTTGGATGCTGGTGCAGTTGGAATGATTCTTTGTAATGACAAGCTTAATGGGAATGAAATTGATAATGATCCTCATTTTCTGCCAACCTCACACATTGCTTATGAAGATGGTGTTGCTGTTTTTGCATATTTAAATTCAACTAAGAATCCACTAGGTTATATTCATCCACCTATAACCAAGTTGAACAAACAGCCTGCTCCAAGCATGGCTGATTTCTCCTCTAGAGGTCCCAACACAATCACACCAGAGATTCTCAAGCCCGATATAACCGCGCCAGGTGTGGACATTATCGCTGCCTATTCAGAAGGAATCAGCCCTACCGAGTTGGCGATCGATAAACGCAGGGTTCCTTTCATGACAATGTCCGGAACATCCATGTCATGTCCTCATGTGGCAGGAATCGTTGGCCTCCTCAAGACTCTCCATCCTGATTGGAGTCCGTCGGCTATTAAATCTGCTATCATGACAACAGCTAGGACGAGGGACAACACTGCTAGACCAATCCATGATCATGTTAATAGGAAGGCAATACCGTTTTCCTATGGATCAGGTCATATTCGACCGAACCGCGCCATGGATCCTGGTTTGGTCTATGAGTTGAACATCAATGATTACCTAAACTTTCTTTGTTTCTTTGGTTATAATCAGACACAGATTAAGATGTTTTCTGATACACATTACCGTTGTGAAGATATAAACATCATGGATTTCAACTACCCTACAATAACTATACCTAAACTATATGGTTCGGTTACTTTGAGTAGGAAGGTGAAGAATGTTGGTTCAGCAGGCACATACACTGCAAAACTTCGTGCCCCAGCTGGAGTTTCCATATCTGTGAAGCCTGAGAAATTGAAATTTGAGAAGATTGGTGAAGAGAAGAGTTTTAAATTGACAGTTGAAGTTACTAGATCAGGTGTGGCTACTGTGTTTGGAGGGTTAACTTGGACAGATGGTAAACACTATGTTAGGAGTCCAATTGTTATTGGGGGAGTCAAAGGTTAG 2322 0.4091 MWSAKHSFFLELITILFSLLHSSVLAEKKSYIVYLGSHDHGEGVTEADFDRVTYTHHEFLQSYVGSYEKAKESMIYSYTRNINGFAVILDEKEAADIAEHPNVVSVLLNRGRKLHTTRSWEFMSMEHNGVAPTGSIFRKARYGEDTIIGNLDTGVWPENPSFGDHGIGPIPSRWKGTCQGDDLSIGFRCNRKLIGARYFNKGYLADAGSDAKYNKTLNTARDYEGHGSHTLSTIGGNYVSGANVFSFGNGTAKGGSPKARVASYKVCWPPVIKDEDCYDADIIAAFDMAIHDGVDVLSLSLGSDAAEYFEDALSIAAFHAVKKGITVVCSAGNSGPKPGTVSNIAPWILTVAASTLDREFYASVSLLDGQSFKGASFSSPLPENKFYPLISAADAKLDEASVENAALCINGTIDPKKVKGKILVCLTGVNARVEKGLSALDAGAVGMILCNDKLNGNEIDNDPHFLPTSHIAYEDGVAVFAYLNSTKNPLGYIHPPITKLNKQPAPSMADFSSRGPNTITPEILKPDITAPGVDIIAAYSEGISPTELAIDKRRVPFMTMSGTSMSCPHVAGIVGLLKTLHPDWSPSAIKSAIMTTARTRDNTARPIHDHVNRKAIPFSYGSGHIRPNRAMDPGLVYELNINDYLNFLCFFGYNQTQIKMFSDTHYRCEDINIMDFNYPTITIPKLYGSVTLSRKVKNVGSAGTYTAKLRAPAGVSISVKPEKLKFEKIGEEKSFKLTVEVTRSGVATVFGGLTWTDGKHYVRSPIVIGGVKG 773
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g07053 773 FunFam Subtilisin-like protease SBT1.5 648 770 - -
Vifa1g07053 773 CDD Peptidases_S8_3 113 597 IPR034197 -
Vifa1g07053 773 Pfam Subtilase family 143 622 IPR000209 GO:0006508|GO:0008236
Vifa1g07053 773 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 31 767 IPR045051 -
Vifa1g07053 773 FunFam subtilisin-like protease SBT1.5 357 500 - -
Vifa1g07053 773 SUPERFAMILY Subtilisin-like 115 635 IPR036852 GO:0004252|GO:0006508
Vifa1g07053 773 Pfam Fibronectin type-III domain 675 768 IPR041469 -
Vifa1g07053 773 Gene3D - 648 770 - -
Vifa1g07053 773 Pfam PA domain 407 477 IPR003137 -
Vifa1g07053 773 PRINTS Subtilisin serine protease family (S8) signature 222 235 IPR015500 -
Vifa1g07053 773 PRINTS Subtilisin serine protease family (S8) signature 143 162 IPR015500 -
Vifa1g07053 773 PRINTS Subtilisin serine protease family (S8) signature 561 577 IPR015500 -
Vifa1g07053 773 CDD PA_subtilisin_like 363 493 - -
Vifa1g07053 773 FunFam Subtilisin-like protease SBT1.5 145 381 - -
Vifa1g07053 773 ProSiteProfiles Serine proteases, subtilase domain profile. 119 631 - -
Vifa1g07053 773 Gene3D Peptidase S8/S53 domain 145 644 IPR036852 GO:0004252|GO:0006508
Vifa1g07053 773 Gene3D - 357 500 - -
Vifa1g07053 773 FunFam Subtilisin-like protease SBT5.3 20 115 - -
Vifa1g07053 773 SUPERFAMILY PA domain 415 484 IPR046450 -
Vifa1g07053 773 Pfam Peptidase inhibitor I9 30 115 IPR010259 -
Vifa1g07053 773 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 18 115 IPR037045 -
Vifa1g07053 773 ProSitePatterns Serine proteases, subtilase family, serine active site. 562 572 IPR023828 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g07053 Vifa-Chr1 1090080879 1090083200 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g07053 18 768 Subtilisin-like Serine Gene Family AT5G59810 62.302 0.0 950
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g07053 - - gmx:100808488 1159.82