Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g07040 ATGTCACTTTCGTTGTTCTCCACTCCTCAGCAACCGCAACCGCAGTCTCTTTTTCAACCACTGCAGCAACAGCAACAATCGCCTTTTCAGCAGCAGACCAATTTGTTCCAGCCACAGCAACCACAACAACAACAATTTCAACAACAGCCACATCAACAGCAATTTCAACAACAGCAACAGCAACAACTGTTGTTTTTGTTCACTAACGATAAAACTCCTGCCAGTTACACCACCAATTGGCCCGATCTACATCCTGATTCCCAGAAGTTTCTACTTCAGATCGAGGAACGGGTATTGGAGTATAGAGATGAAAGCCAGAGACTTGATCAGTGTAATCGTCTTTATGATTCTTCCGTTTCGAATGATGGGTTTGAGGTTGATGCAAGCCATATTGTTCAGGAACTTGGTGGAATCAGCACTGCTATGGAACGGCAGAAAACTTTGCTACATGAATTGATGTCAGTTGTTAAGGATATGTTACGTAATACAGAGGTTGCTGTTCGATCGTTTATGATCCTACGTCCAAGGTTCCATCATCCTAGTGGGGGAGCATCAAGTGCCACTGCCCCATCACAGACCCCGGGAGCAACAACACCTAGTTTGAACAGCCAACCAACAGCTACGTCTATAGTGCCTGTTTTTGATTTCTACAGTGGTCTTCCGAAGAAACCATCACCCTTTTTACAGCAAACAATTCTTCGATTTGAGAAATATCTTGGTGAATGTCATCAGTGGATTCAAGAGTTAGAGCAGCTGCTTCTCCTAGAATCTGAAAAAAATGCTTCTAATAATGGATCCTCGTTATTGCAGTCTCTTCCCAAAGTCATGACAAATGTGCATGACTTTTTTGTTCACGTGGCCGCAAAGGTGGAGAGCATTCATCAGTACATGGAATCTATGAAATCAGCATATCTAGCTGATCAGCGCCGCCGAGGGGAGGTGAATGATCCATTTCTAGAGGCTGACCGACGAGAAACTGCAAGACAAGAAGCTGCATCAAAAAGAGTTCATCCGACATTGCATTTACCTGCAAATTCACAACCCTCAACTCAAGTTGCTGGGTTGTTTTCCAGTTCAGGAACTCAAGGAGCATTGACTGCCCAACAGACTGCTGCAACAACTTCATCTTTGTCAACAGGAAGTGGTTTGTCTCTTTTTAGCACACCGACTTCTGCTCCATCATCGTCTATGTCATCTTTGTTTGCAACACCAACAACTCCGGCTCAAGGAACCTCATGGTTTGGATCATCTAGTGCTACGCCTCAAACCTCACTTTTTGGTTCTGCCTCATCATCGCTACCTGGTGCGACATCAACTCCCTCTCTGTTCGGTAATAGTACTCCATTGTTTAGTTCAACTCCGGCTGCAAGTTCGCTCTTTTCAACTCCGTTTGCTTCAGGTACTTTCTTGGTTCATACTTTGTCTTAA 1428 0.4433 MSLSLFSTPQQPQPQSLFQPLQQQQQSPFQQQTNLFQPQQPQQQQFQQQPHQQQFQQQQQQQLLFLFTNDKTPASYTTNWPDLHPDSQKFLLQIEERVLEYRDESQRLDQCNRLYDSSVSNDGFEVDASHIVQELGGISTAMERQKTLLHELMSVVKDMLRNTEVAVRSFMILRPRFHHPSGGASSATAPSQTPGATTPSLNSQPTATSIVPVFDFYSGLPKKPSPFLQQTILRFEKYLGECHQWIQELEQLLLLESEKNASNNGSSLLQSLPKVMTNVHDFFVHVAAKVESIHQYMESMKSAYLADQRRRGEVNDPFLEADRRETARQEAASKRVHPTLHLPANSQPSTQVAGLFSSSGTQGALTAQQTAATTSSLSTGSGLSLFSTPTSAPSSSMSSLFATPTTPAQGTSWFGSSSATPQTSLFGSASSSLPGATSTPSLFGNSTPLFSSTPAASSLFSTPFASGTFLVHTLS 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g07040 475 MobiDBLite consensus disorder prediction 1 53 - -
Vifa1g07040 475 MobiDBLite consensus disorder prediction 184 204 - -
Vifa1g07040 475 MobiDBLite consensus disorder prediction 340 357 - -
Vifa1g07040 475 Gene3D - 223 313 - -
Vifa1g07040 475 MobiDBLite consensus disorder prediction 181 204 - -
Vifa1g07040 475 MobiDBLite consensus disorder prediction 316 335 - -
Vifa1g07040 475 PANTHER NUCLEOPORIN P58/P45 NUCLEOPORIN-LIKE PROTEIN 1 8 464 IPR024882 GO:0005643|GO:0006913|GO:0008139|GO:0017056
Vifa1g07040 475 MobiDBLite consensus disorder prediction 316 357 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g07040 31 448 NAC Transcription Factor Family AT4G37130 58.333 5.56e-172 492
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g07040 K14307 - gmx:100805204 593.193
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g07040 1 1088160690 1088164143 Vifa1g07040 1 1088160690 1088164143 ECH