Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g07033 ATGGCCATGGATGAATTCCTGTTCAACACTCTCATTTCAACCATTCTCACCCTGTTAATTGGAGCTTTGATTTATCACATAAAGAAAACACATACAAAGAACTGCACTGCACCTCAAGCTGAAGGTGCATGGCCTATTATAGGTCATTTGCATCTCTTTGGAGCTCAGAAACTTACACACAAAACACTTGGTACGATGGCTGACAAACATGGACCGATTTTCACAATCAAACTTGGTTCATACAATGTTCTAGTACTTAGCAGCAGCGAAATGGCCAAAGAATGTTTCACTCTTCACGACAAAACATTCTCCGCTAGACCCTTGGTTGCAGCCTCCAGGTTAATGGGATACAATTATGCTATGTTTGGTTTCACTCCTTGTGGTCCTTATTGGCGTGAGATGAGGAAGTTAGCAACACTAGAGCTTCTTTCGAATCACCGGCTCGAGCTATTGAAGAACACAAGAGTGTCTGTGATAGATGTTGCAGTGAGAGAGCTTTATAGGTTGTGGACGATAAAGGGTTGTCGGGAAGAAGGGATTTTGGTTGACATGAAGGAGTGGTTTGGTGATTTGACGCTTAATATTGCTTTGAAAATGGTGGGAGGGAAGGTATATCATGGAGGAGAAGATGGTGAAGGTAGGAAGTATAGGGAAGCTATGAGAGATTGGGTGTGTTTGTTTGGTGTGTTTGTGATGTCTGATGCAATTCCTTTTCTGGGTTGGTTTGATGTTAATGGTTATGAGAAGGCTATGAAGAGAACTGCGAAGAAATTGGATAGTTTGGTTGAAGGGTGGCTGGAGGAACACAAAAGGAAAAGAGATTTGGGTGATAGTGGAAATGAAGAACATGATTTTATGGATGTTATGTTGAATGTTTTGCAGGGTTCAGAGATTTGTGGTTATGGTTCAGATACAATCATCAAGGCTACTTGTCTGAATCTGATTTTAGCAGGAAGTGACACCACCATGGTGAGTCTAACATGGGCACTATCCCTACTACTCAATCATCAAATGGAACTCAAAAAGGCACAGGATGAGTTGAACACTCATATTGGTAAGGACAGGAAGGTGGAAGAATCTGACATAAAGAACTTAGTATACCTTCAAGCCATTGTCAAGGAAACATTGCGACTCTATCCACCAAGTCCGATTATCACCTTGCACGAATCAATCAACGACTGCACTTTTTCATGCGGCTATCACATTCCTGCTGGTACACAGTTAATGGTGAACGTTTGGAAGATCCACCGAGACGGTCGTGTTTGGACTGACCCTCATGATTTCAAGCCTGAGAGGTTTTTGACAAGCCACAAAGATGTTGACATCAGAATTCAGAACCATGAGCTTGTACCTTTTAGTTCTGGAAGGAGAGCATGCCCAGGGGCCTCATTGGCTTTGAGAGTGGTGCATTTGACTTTGGCTAGACTGCTACACTCATTCAATGTTGCTTCTCCCTCAAATCAAGGTGTAGACATGACAGAAAGCCCTGGACTCACAAATTTAAAAGCAACTCCACTTGAAGTCGTTCTAACACCGCGTCTAGATACCAACCTTTATGATAACTAG 1566 0.4246 MAMDEFLFNTLISTILTLLIGALIYHIKKTHTKNCTAPQAEGAWPIIGHLHLFGAQKLTHKTLGTMADKHGPIFTIKLGSYNVLVLSSSEMAKECFTLHDKTFSARPLVAASRLMGYNYAMFGFTPCGPYWREMRKLATLELLSNHRLELLKNTRVSVIDVAVRELYRLWTIKGCREEGILVDMKEWFGDLTLNIALKMVGGKVYHGGEDGEGRKYREAMRDWVCLFGVFVMSDAIPFLGWFDVNGYEKAMKRTAKKLDSLVEGWLEEHKRKRDLGDSGNEEHDFMDVMLNVLQGSEICGYGSDTIIKATCLNLILAGSDTTMVSLTWALSLLLNHQMELKKAQDELNTHIGKDRKVEESDIKNLVYLQAIVKETLRLYPPSPIITLHESINDCTFSCGYHIPAGTQLMVNVWKIHRDGRVWTDPHDFKPERFLTSHKDVDIRIQNHELVPFSSGRRACPGASLALRVVHLTLARLLHSFNVASPSNQGVDMTESPGLTNLKATPLEVVLTPRLDTNLYDN 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g07033 521 PRINTS P450 superfamily signature 370 381 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g07033 521 PRINTS P450 superfamily signature 450 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g07033 521 PRINTS P450 superfamily signature 317 334 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g07033 521 PRINTS P450 superfamily signature 459 470 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g07033 521 SUPERFAMILY Cytochrome P450 43 513 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g07033 521 CDD CYP82 71 513 - -
Vifa1g07033 521 PANTHER CYTOCHROME P450 82C3-RELATED 18 519 - -
Vifa1g07033 521 Pfam Cytochrome P450 38 499 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g07033 521 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 452 461 IPR017972 GO:0005506|GO:0016705
Vifa1g07033 521 Gene3D Cytochrome P450 27 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g07033 521 PRINTS E-class P450 group I signature 459 482 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g07033 521 PRINTS E-class P450 group I signature 306 323 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g07033 521 PRINTS E-class P450 group I signature 369 387 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g07033 521 PRINTS E-class P450 group I signature 67 86 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g07033 521 PRINTS E-class P450 group I signature 91 112 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g07033 521 PRINTS E-class P450 group I signature 326 352 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g07033 521 PRINTS E-class P450 group I signature 411 435 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g07033 521 PRINTS E-class P450 group I signature 449 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vifa1g07033 521 FunFam Cytochrome P450 82C4 27 511 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g07033 Vifa-Chr1 1086989237 1086992282 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g07033 3 519 Cytochrome P450 AT4G31970 50.285 0.0 541
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g07033 - - gmx:606549 810.061