Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vifa1g07004 | ATGAATTCACAACCTAACAACCATACTACAGAATCTAAGGATGTTGGTAGTTCGAGTTCTAATTCGAGCGGAAATAATAACTTACCTCAGAAAAAGATTTTGTCTGACTCGAAGTTTCAACATACGACAGAGCCATCGGGTGCCTTAAACCAAGTCAGACATAGGTTTCCAGATGTATTTCAACAAAAAGGTGGAAGCTATGCAGATCTTCCTGCTGCTAAAATTTCCGAGCTAATGAAATCATCAAGTTTGGATAATGCTCCTACTCAATCACTTTTGAGTGTTGTGAATGGTATCCTAGAAGAAAGTGTCGAAAGAAGAAATGGAGAAATACCACCTCGTGTGGCTTGCTTGTTAAGAAAAGTTGTTCAAGAGATCGAGCGGAGAATATCGACACAACAAGGACATTTAAGAACTCAAAACAATCTTTTTAAAACTCGCGAAGAAAAATATCAATCAAGAATAAGAGTACTTGAAGCTCTAGCATCAGGAACCAATGAGGAGAATATCATAAAGGAAGAAAAAAGTGCACATGACTCAAAGCCAATTGAGAAGATTGTAATAGAAGAAAAGAAGACAAAAGATATAAATCATGTTGAAAAGACTAAAGAGGATGAAAAAAAGAAAGAAATTGATAGGGAAGTTATTAGATTAATGAAAGAAGTGGAAGACAAAAATATGGAAAAGAAGGAGATTGATAAAGAAGTTAAGAGATTGATCAAAGAGGTTGAAGAAAAAAATATGGAAAAGAAGGAGATTGATAAAGAAGTTAAGAGATTGATCAAAGAGGTTGAAGAAAAAAATATGGAAATTTCAACATTCAAGCAAGAACTAGAAAAAATGAAAAAAAGATACGAAGTACAATGTACAAAGATCGAAAATATAGAAAGGAAGGATATTGATAAAGAAGTGGAAGGAAAAAATATGGAAAAGAGGGAAGTTGATGAAGAAATTATGAGATTGAAGAAAGAGGTCGAAGAAAAAAGTATGGAAAAGAAGGAAATTGATAAAGAAGTTATGAGATTGAAGAAAGAGGTGGAAGAAAAAAATGTGGAAATTTCGACGATGAAGCAAGAACTTGAAACAATGAAAAATAGATATGAAGAACAATGTTCAAAGTTGAAATCGGAAGCCGAGGATGTTGAATTAGAATTGAAACAGAAATCGCGAGAACATGAGGCTATAATGGAAAAGTTAAGAAATAAGGTTAGAGAGAGTGAAGCTATTATGGAGTCAAAATATCAGAAGTGGAACATGAAACAAAACATAATACAGAAAGCTGTCAGTTTTCAATTCAGTTCCATACAGAAATTGAAATTGTCTTGGGAATCTATCAAGCAAGATGTTGTGAAAGAGAGAATGATTTACAAAGAGGAATGCAATCGACTAGGTGTGAATCTTAAACCACTAGTGCATGCAGCTGAGAATTATCAAACAGTTCTTGCTGAAAATAGAAAATTATTCAATGAACTTCAAGAATTAAAAGGAAATATTAGAGTATATTGTAGAATTAGACCCTTTATTCCTGGACAAAAAGAAAAACAATCTATTGTTGAGCGCATTGGCGAATCAGATTTGGTTGTAGCAAATCCATCCAAACAAGGGAAAGAAGCACTTAAAACATTTAAGTTTAACAAGATCTTTGGTCCTACCTCAACTCAAGCTGAGGTGTACGATGATATACAAGACTTTATAAGATCAGTACTTGATGGTTTTAATGTGTGCATATTTGCTTATGGACAGACAGGTTCAGGAAAAACTTATACAATGAGTGGCCCAAATGGTGCAACTAATGAGAGTCTTGGTGTTAACTATCGAGCTCTAAATGACCTCTTCAACATATCCTCAAGTAGACAAAGTTCCATAGTTTATGACATTGGAGTTCAAATAATTGAGATCTATAATGAACAAGTTCGCGATTTGCTAACAACCGATATATCTGTCAAAAAATTTGGGATATTGAATCACTCTCAACCAAATGGTTTAGCAGTACCTGATGCTAGCATGCACCCTGTCAAATCAACTGCCGATGTCATAAAACTAATGGACATTGGTTTAAAAAATAGAGCAAAGGGTTCAACTGCTATGAATGAAAGAAGTAGCCGATCTCACAGTGTGGTTTCGATTCATGTTCGTGGGGCGGATAAGAAATCTGGTTCGACTCTCCAAGGTAATCTTCATCTGATAGATTTGGCAGGAAGTGAAAGGATAGATCGCTCTGAAGTAATCGGAGATAGACTAAAGGAAGCACAACATATTAACAAATCACTGTCTGCTCTTGGAGATGTCATTTTTTCACTTTCTCAAAAGAGTTCTCATATACCATATAGAAACAGCAAACTCACACAAATTTTGCAATCCTCACTAGGTGGTCATGCAAAGACACTCATGCTAGTTCAAATCAATTCAGATGTAAAGTCTTATTCTGAATCTTTGAGTACTTTGAAGTTTGCTGAGAGAGTTTCTGGAGTTGAGTTAGGAGTTGCAAAAAGTACCAAAGATGGAAGAGATGTTAGAGAATTAATGGAACAGGTGGCTTCTCTCAAAGACACGATTTCGACAAAAGATGAAGAAATCGAGCGATTACAATTACTTAAGGATCTAAAAAATGTTAGCAATTCTGAGAAGCTTGAAGATTAA | 2640 | 0.3477 | MNSQPNNHTTESKDVGSSSSNSSGNNNLPQKKILSDSKFQHTTEPSGALNQVRHRFPDVFQQKGGSYADLPAAKISELMKSSSLDNAPTQSLLSVVNGILEESVERRNGEIPPRVACLLRKVVQEIERRISTQQGHLRTQNNLFKTREEKYQSRIRVLEALASGTNEENIIKEEKSAHDSKPIEKIVIEEKKTKDINHVEKTKEDEKKKEIDREVIRLMKEVEDKNMEKKEIDKEVKRLIKEVEEKNMEKKEIDKEVKRLIKEVEEKNMEISTFKQELEKMKKRYEVQCTKIENIERKDIDKEVEGKNMEKREVDEEIMRLKKEVEEKSMEKKEIDKEVMRLKKEVEEKNVEISTMKQELETMKNRYEEQCSKLKSEAEDVELELKQKSREHEAIMEKLRNKVRESEAIMESKYQKWNMKQNIIQKAVSFQFSSIQKLKLSWESIKQDVVKERMIYKEECNRLGVNLKPLVHAAENYQTVLAENRKLFNELQELKGNIRVYCRIRPFIPGQKEKQSIVERIGESDLVVANPSKQGKEALKTFKFNKIFGPTSTQAEVYDDIQDFIRSVLDGFNVCIFAYGQTGSGKTYTMSGPNGATNESLGVNYRALNDLFNISSSRQSSIVYDIGVQIIEIYNEQVRDLLTTDISVKKFGILNHSQPNGLAVPDASMHPVKSTADVIKLMDIGLKNRAKGSTAMNERSSRSHSVVSIHVRGADKKSGSTLQGNLHLIDLAGSERIDRSEVIGDRLKEAQHINKSLSALGDVIFSLSQKSSHIPYRNSKLTQILQSSLGGHAKTLMLVQINSDVKSYSESLSTLKFAERVSGVELGVAKSTKDGRDVRELMEQVASLKDTISTKDEEIERLQLLKDLKNVSNSEKLED | 879 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vifa1g07004 | 879 | Gene3D | Kinesin motor domain | 440 | 826 | IPR036961 | - | |
Vifa1g07004 | 879 | Pfam | Kinesin motor domain | 503 | 822 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Vifa1g07004 | 879 | Coils | Coil | 208 | 298 | - | - | |
Vifa1g07004 | 879 | MobiDBLite | consensus disorder prediction | 1 | 49 | - | - | |
Vifa1g07004 | 879 | ProSiteProfiles | Kinesin motor domain profile. | 497 | 824 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Vifa1g07004 | 879 | Coils | Coil | 304 | 416 | - | - | |
Vifa1g07004 | 879 | PANTHER | KINESIN-LIKE PROTEIN KLP-3 | 297 | 865 | IPR027640 | GO:0003777|GO:0007018 | |
Vifa1g07004 | 879 | MobiDBLite | consensus disorder prediction | 1 | 53 | - | - | |
Vifa1g07004 | 879 | Coils | Coil | 477 | 497 | - | - | |
Vifa1g07004 | 879 | FunFam | p-loop containing nucleoside triphosphate hydrolases superfamily protein | 439 | 826 | - | - | |
Vifa1g07004 | 879 | Coils | Coil | 838 | 865 | - | - | |
Vifa1g07004 | 879 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 497 | 862 | IPR027417 | - | |
Vifa1g07004 | 879 | Gene3D | - | 334 | 377 | - | - | |
Vifa1g07004 | 879 | Gene3D | - | 251 | 293 | - | - | |
Vifa1g07004 | 879 | PRINTS | Kinesin heavy chain signature | 694 | 711 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Vifa1g07004 | 879 | PRINTS | Kinesin heavy chain signature | 725 | 743 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Vifa1g07004 | 879 | PRINTS | Kinesin heavy chain signature | 571 | 592 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Vifa1g07004 | 879 | PRINTS | Kinesin heavy chain signature | 774 | 795 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Vifa1g07004 | 879 | SMART | kinesin_4 | 495 | 832 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vifa1g07004 | Vifa-Chr1 | 1082411756 | 1082416540 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vifa1g07004 | 180 | 858 | Calmodulin-binding Proteins | AT5G65930 | 29.471 | 4.54e-63 | 230 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vifa1g07004 | K10406 | - | gmx:100779403 | 1130.93 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Vifa1g07004 | 1 | 1082411756 | 1082416540 | Vifa1g07005 | 1 | 1082411756 | 1082416540 | PCT |